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Job DescriptionP15288
Confidence100.00%DateThu Jan 5 11:34:45 GMT 2012
Rank16Aligned Residues357
% Identity17%Templatec1cg2D_
PDB info PDB header:metallocarboxypeptidaseChain: D: PDB Molecule:carboxypeptidase g2; PDBTitle: carboxypeptidase g2
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30 .........40.........50... ......60.........70........
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Query Sequence  SPQPLWDIFAKICSIPHPSYHEE. . . QLAEYIVGWAKEKGFHVERDQVG. . . . . . NILIRKPATAGMENRKPVVLQAHLD
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Template Sequence  EQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGR. . . . GGKNLLLMSHMD
Template Known Secondary structure  TS

BTT
TT

STT

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   3940.........50.........60.........70.........80.........90.........100.. .......110....
 
   7980.........90.........100.........110.........120.........130.. .......140.........150.......
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Query Sequence  MVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENV. VHGPLEVLLTMTEEAGMDGAFGLQG
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Template Sequence  TVYLKGI. . . . . LAKAPFR. . VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQ
Template Known Secondary structure  BS

TT.....S

..TT
TTTTTTTT


SSS
GGGTTTTT
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   115....120. ....... .130.........140.........150.........160.........170.........180.......
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  NWLQADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAG
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Template Sequence  EEAKL. . . . . . . . . . ADYVLSFEPTSAG. . . . . DEKLSLGTSGIAYVQVNITG. KASHAGAAPELGV. NALVEASDLVLR
Template Known Secondary structure  ..........
S


TT.....S
S

.B
TTS
GGGSB.
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   188.190.. .......200..... ....210.........220..... ....230........ .240.........250
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  HAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSR
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Template Sequence  TM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  G..............................................................................
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   251.
 
   318.320.........330.........340.........350.........360.........370.........380..... ....390..
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Query Sequence  DTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKL. . . . . AGAKTEA
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Template Sequence  . . . . . . . . . . . . NIDDKAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQKKLPEADVKVIV
Template Known Secondary structure  ............GG
BGGGT
SSTT
SSSTS
SSTT
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   253......260.........270.........280.........290.........300.........310.........320
 
   393......400. ........410.........420.........430.........440....... ..450...... ...460.........
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Query Sequence  KGAYPGWQP. DANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMV. SIGPTITGP. HSPDEQVHIESVG
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Template Sequence  TRGRPAFNAGEGGKKLVDKAVAYYKEAGGTLGVEERTGGGTDAAYAALS. . GKPVIESLGLPGFGYHSDKAEYVDISAIP
Template Known Secondary structure 
S


TT


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BS


TGGG..
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TTSSS

GGG
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   321........330.........340.........350.........360......... 370.........380.........390........
 
   470.........480....
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Query Sequence  HYWTLLTELLKEIPA
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Template Sequence  RRLYMAARLIMDLGA
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   399400.........410...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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