Return to main results Retrieve Phyre Job Id

Job DescriptionP77744
Confidence97.65%DateThu Jan 5 12:32:25 GMT 2012
Rank42Aligned Residues82
% Identity17%Templated2fxaa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AFQVKIHQIRAFVEVARQG. . SIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLILEEL
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Template Sequence  PYDLNINEHHILWIAYQLNGASISEIAKFGVXHVSTAFNFSKKLEERGYLR. . FSKRTYVQLTEEGTEVFWSLLEEFDPT
Template Known Secondary structure  GGT

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   41........50.........60.........70.........80.........90. ........100.........110........
 
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Query Sequence  RAAQED
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Template Sequence  RNAVFK
Template Known Secondary structure  G
Template Predicted Secondary structure 
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   125....130
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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