Job Description P77744 Confidence 49.31% Date Thu Jan 5 12:32:25 GMT 2012 Rank 322 Aligned Residues 205 % Identity 12% Template d1xs5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.85

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		L	A	G	Q	I	N	I	G	M	G	A	S	I	S	R	S	L	M	P	A	V	I	S	R	F	H	Q	Q	H	P	Q	V	K	V	R	I	M	E	G	Q	L	V	S	M	I	N	E	L	R	Q	G	E	L	D	F	T	I	N	T	Y	Y	Q	G	P	.	.	.	.	Y	D	H	E	F	T	F	E	K	L	L	E
Query Conservation																																																																		.	.	.	.
Alig confidence																																							.																											.	.	.	.
Template Conservation																																							.
Template Sequence		K	D	E	T	V	G	V	G	V	L	S	E	P	H	A	R	L	L	E	I	A	K	E	E	V	K	K	Q	H	I	E	L	R	I	V	E	F	.	T	N	Y	V	A	L	N	E	A	V	M	R	G	D	I	L	M	N	F	F	Q	H	V	P	H	M	Q	Q	F	N	Q	E	H	N	G	D	L	V	S	V	G	N
Template Known Secondary structure												S	T	T														T	T	T									.	S												T	S	S	S																		T
Template Predicted Secondary structure																																							.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.																			220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	F	A	I	F	C	R	P	G	H	P	A	I	G	A	R	S	I	K	Q	L	L	D	Y	S	W	T	M	P	T	P	H	G	S	Y	Y	K	Q	L	S	E	L	L	D	D	Q	A	Q	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	G	V	V	C	E	T	F	S	A
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.
Template Sequence		V	H	V	E	P	L	A	L	Y	S	.	.	.	R	T	Y	R	H	V	S	D	F	P	A	G	A	V	I	A	I	P	N	D	S	S	N	E	A	R	A	L	R	L	L	E	A	A	G	F	I	R	M	R	A	G	S	G	L	F	A	T	V	E	D	V	Q	Q	N	V	R	N	V	V	L	Q	E	V	E	S	A
Template Known Secondary structure												.	.	.	S	S			S	G	G	G			T	T								S														T	T	S					T	T			T	T			G	G	G					T	T									G	G
Template Predicted Secondary structure												.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		C	I	S	L	V	A	K	S	D	F	L	S	K	L	P	E	E	M	G	C	D	P	L	H	G	Q	G	L	V	M	L	P	V	S	E	I	L	P	K	A	A	Y	Y	L	I	Q	R	R	D	S	R	Q	T	P	L	T	A	S	L	I	T	Q	F	.	.	R	R	E	C	G	Y	L	Q
Query Conservation																																																																	.	.
Alig confidence																																																																	.	.
Template Conservation
Template Sequence		L	L	P	R	V	F	D	Q	V	D	G	A	V	I	N	G	N	Y	A	I	M	A	G	L	S	A	R	R	D	G	L	A	V	E	P	D	A	S	A	Y	A	N	V	L	V	V	K	R	G	N	E	A	D	A	R	V	Q	A	V	L	R	A	L	C	G	G	R	V	R	T	Y	L	K
Template Known Secondary structure		G					G	G	G	S	S												T	T			T	T	T	T		S				S		G	G	G	G								T	T		T	T												T	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions