Return to main results Retrieve Phyre Job Id

Job DescriptionP77744
Confidence97.16%DateThu Jan 5 12:32:25 GMT 2012
Rank78Aligned Residues203
% Identity11%Templated1twya_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.........140.........150 .........160.........170..
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Query Sequence  GQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTIN. . TYYQGPYDHEFTFEKLLEKQFA
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Template Sequence  SEITISGSTSVA. RIXDVLAEKYNQQHPETYVAVQGVGSTAGISLLKKGVADIAXTSRYLTESEAQNTLHTFTLAFDGLA
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TT
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TTT

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   28.30......... 40.........50.........60.........70.........80.........90.........100......
 
   173......180.........190. ........200.........210.........220..... .
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Query Sequence  IFCRPGHPAIGARSIKQLL. . . . . . . . . . . . . . . . . DYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVC. . . . . . . . . E
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Template Sequence  IVVNQANPVTNLTREQLYGIYKGQITNWKQVGGNDQKIAVVTREASSGTRYSFESLXGLTKTVKDREVSDVAPTALVVNS
Template Known Secondary structure 
TT




TS

BGGGGTS
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B

TT
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   227..230.........240.........250.........260........ .270.........280.........290........
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Query Sequence  TFSACISLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILP. . . . . . KAAYYLIQRRDSRQTPLTASLITQFRRECG
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Template Sequence  NSXXKTLVNHNTQAVGFISIGSVDKSVKAIQFEKADPTSDNIAKHTYQLSRPFLILHYSDNADEQTKEFIAFLKSESA
Template Known Secondary structure 
TTGGG

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   187..190.........200.........210.........220.........230.........240.........250.........260....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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