Return to main results Retrieve Phyre Job Id

Job DescriptionP77744
Confidence97.04%DateThu Jan 5 12:32:25 GMT 2012
Rank86Aligned Residues76
% Identity11%Templatec3kp3B_
PDB info PDB header:transcription regulator/antibioticChain: B: PDB Molecule:transcriptional regulator tcar; PDBTitle: staphylococcus epidermidis in complex with ampicillin
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10......... 20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 




.











Query SS confidence 

















.




























































Query Sequence  AFQVKIHQIRAFVEVARQ. GSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELR
Query Conservation     
 
  
  
  
   .

 
 

  
 


 


  
  

  

  

 
   
  

  
  
   
        
Alig confidence 

















.



























....




























Template Conservation     

  
  

        
  


    
    

  
  
   
.... 
 
   
 

 

               
Template Sequence  EYGISAEQSHVLNMLSIEALTVGQITEKQGVNKAAVSRRVKKLLNAE. . . . LVKLEKIIKLSNKGKKYIKERKAIMSHIA
Template Known Secondary structure  TTT

TSS

B
TS
TTT....S



B
Template Predicted Secondary structure 












....





Template SS confidence 















































































   33......40.........50.........60.........70......... 80.........90.........100........
 
   81
Predicted Secondary structure 
Query SS confidence 
Query Sequence  A
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  S
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   119
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions