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Job DescriptionP77744
Confidence99.77%DateThu Jan 5 12:32:25 GMT 2012
Rank22Aligned Residues204
% Identity17%Templatec3ho7A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:oxyr; PDBTitle: crystal structure of oxyr from porphyromonas gingivalis
Resolution1.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  AGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAI
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Template Sequence  TGRLNIAVLPTIAPYLLPRVFPIWKKELAGLEIHVSEMQTSRCLASLLSGEIDMAIIAS. . KAETEGLEDDLLYYEEFLG
Template Known Secondary structure 

TTTSTT

TS
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TT
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   90.........100.........110.........120.........130.........140........ .150.........160.......
 
   174.....180.... .....190.........200.........210......... 220.........230.........240.........250
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Query Sequence  FCRPGHPAIGA. . RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP. QVGVVCETFSACISLVAKSDFLSKLPEEMGC
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Template Sequence  YVSRCEPLFEQDVIRTTEVNPHRLWLLDEGHCFRDQLVRFCQMKGLHERQTAYSGGSMEAFMRLVESGQGITFIPQLTVE
Template Known Secondary structure 
TTSGGGGSSSB
GGG

GGGB


TTTTTTTSTTT
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S

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GGGGG
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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   251........260.........270.........280.........290.........
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Query Sequence  DPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY
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Template Sequence  QLSPSQKELVRPFGMPRPVREVRLAVRQDYSRRKLREQLIGLLRSAVPS
Template Known Secondary structure  GS
TT
B
SSTT
S
TTS
G
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   248.250.........260.........270.........280.........290......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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