 |
Job Description | P77744 | Confidence | 76.55% | Date | Thu Jan 5 12:32:25 GMT 2012 |
Rank | 223 | Aligned Residues | 35 |
% Identity | 6% | Template | c1r71B_ |
PDB info |
PDB header:transcription/dna | Chain: B: PDB Molecule:transcriptional repressor protein korb; |
PDBTitle: crystal structure of the dna binding domain of korb in2 complex with the operator dna
|
Resolution | 2.20 Å |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | H | Q | I | R | A | F | V | E | V | A | R | Q | G | . |
S | I | R | G | A | S | R | M | L | N | M | S | Q | P | A | L | S | K | S | I | Q |
Query Conservation |   |
|   |   |
|   |   |
|   |   |
|   |   |   |
| . |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|
|   |
|   |
|   |
|
|   |   |
|   |
Template Sequence |   |
R | E | I | A | D | F | I | G | R | E | L | A | K | G | K | K | K | G | D | I | A | K | E | I | G | K | S | P | A | F | I | T | Q | H | V | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|