Job Description P77744 Confidence 99.78% Date Thu Jan 5 12:32:25 GMT 2012 Rank 20 Aligned Residues 205 % Identity 18% Template c1al3A_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:cys regulon transcriptional activator cysb; PDBTitle: cofactor binding fragment of cysb from klebsiella aerogenes Resolution 1.80 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	Q	I	N	I	G	M	G	A	S	I	S	R	S	L	M	P	A	V	I	S	R	F	H	Q	Q	H	P	Q	V	K	V	R	I	M	E	G	Q	L	V	S	M	I	N	E	L	R	Q	G	E	L	D	F	T	I	N	T	Y	Y	Q	G	P	Y	D	H	E	F	T	F	E	K	L	L	E	K	Q	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	G	S	L	Y	V	A	T	T	H	T	Q	A	R	Y	A	L	P	G	V	I	K	G	F	I	E	R	Y	P	R	V	S	L	H	M	H	Q	G	S	P	T	Q	I	A	E	A	V	S	K	G	N	A	D	F	A	I	A	T	E	A	L	H	L	Y	D	D	L	V	M	L	P	C	Y	H	W	N	R	S	I
Template Known Secondary structure																		T	S												T																				T	T			S					S	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		173	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		I	F	C	R	P	G	H	P	A	I	G	A	.	R	S	I	K	Q	L	L	D	Y	S	W	T	M	P	T	P	H	G	S	Y	Y	K	Q	L	S	E	L	L	D	D	Q	A	Q	T	P	Q	V	G	V	V	C	E	T	F	S	A	C	I	S	L	V	A	K	S	D	F	L	S	K	L	P	E	E	M	G	C	D
Query Conservation														.
Alig confidence														.																																																																		.
Template Conservation																																																																																.
Template Sequence		V	V	T	P	E	H	P	L	A	T	K	G	S	V	S	I	E	E	L	A	Q	Y	P	L	V	T	Y	T	F	G	F	T	G	R	S	E	L	D	T	A	F	N	R	A	G	L	T	P	R	I	V	F	T	A	T	D	A	D	V	I	K	T	Y	V	R	L	G	L	G	V	G	V	I	A	S	M	A	V	.	D
Template Known Secondary structure					T	T	S	T	T	T	T	T	S									T	S							T	T	S	T	T												T										S	S											T	S							G	G	G		.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	H	G	Q	G	L	V	M	L	P	V	S	E	I	L	P	K	A	A	Y	Y	L	I	Q	R	R	D	S	R	Q	T	P	L	T	A	S	L	I	T	Q	F	R	R	E	C	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	S	D	P	D	L	V	K	L	D	A	N	G	I	F	S	H	S	T	T	K	I	G	F	R	R	S	T	F	L	R	S	Y	M	Y	D	F	I	Q	R	F	A	P	H	L	T
Template Known Secondary structure		T	T	T		T	T	S						B	T	T	B											T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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