Return to main results Retrieve Phyre Job Id

Job DescriptionP38052
Confidence1.88%DateThu Jan 5 11:57:53 GMT 2012
Rank46Aligned Residues52
% Identity17%Templatec3fnkA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:cellulosomal scaffoldin adaptor protein b; PDBTitle: crystal structure of the second type ii cohesin module from2 the cellulosomal adaptor scaa scaffoldin of acetivibrio3 cellulolyticus
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150.. .......160...
Predicted Secondary structure 

















.



Query SS confidence 









































.










Query Sequence  VAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALA. SGVRPGVAKAD
Query Conservation 


 
       
                  
   
      .  
  
   
 
Alig confidence 














.

























.










Template Conservation 






   
 
 
.
   





 

 



 
  
 


 



  

 
Template Sequence  VGFKVLQKKATTVVF. EDSETMPNGITGTTLFNWYGNRIQSGYFVIQPGEINSA
Template Known Secondary structure  SS


B

.


TT
TT
SSSTTS
B

SS




BS

Template Predicted Secondary structure 


.





















Template SS confidence 





















































   123......130....... ..140.........150.........160.........170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions