Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEJ4
Confidence99.01%DateThu Jan 5 11:23:28 GMT 2012
Rank35Aligned Residues86
% Identity22%Templatec3na3A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:dna mismatch repair protein mlh1; PDBTitle: mutl protein homolog 1 isoform 1 from homo sapiens
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   337..340.........350.........360.........370.........380.........390.........400.........410......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  IKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTISGTGLGLAIVQRIVDNH
Query Conservation 
  

 


 

       
 
          
 
 
 
 

       

  
 
   
    
 



 
   

   
Alig confidence 























.
































.
















....
Template Conservation      
 


 




 
  
 
 
.       
 
 


 

    
        


.  
 
 

 

 

   ....
Template Sequence  PANAIKEMIENCLDAKSTSIQVIV. KEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSK. LQSFGFRGEALASISHV. . . .
Template Known Secondary structure  TT
S.GGGTS
S



GGGGGTTTSTT

SS.





TT
S....
Template Predicted Secondary structure 



.















.









....
Template SS confidence 















































































   28.30.........40.........50. ........60.........70.........80.... .....90.........100.
 
   417..420.........
Predicted Secondary structure 






Query SS confidence 












Query Sequence  NGMLELGTSERGG
Query Conservation 

 
   
    
Alig confidence  .











Template Conservation  .
   
 

    
Template Sequence  . AHVTITTKTADG
Template Known Secondary structure  .S
TT
Template Predicted Secondary structure  .


Template SS confidence 












   111........120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions