Job Description P0AEJ4 Confidence 98.46% Date Thu Jan 5 11:23:28 GMT 2012 Rank 38 Aligned Residues 116 % Identity 6% Template c3lnrA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:aerotaxis transducer aer2; PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2 Resolution 2.64 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		174	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure												.																																																																				.	.
Query SS confidence												.																																																																				.	.
Query Sequence		G	A	W	L	F	I	R	I	Q	N	.	R	P	L	V	D	L	E	H	A	A	L	Q	V	G	K	G	I	I	P	P	P	L	R	E	Y	G	A	S	E	V	R	S	V	T	R	A	F	N	H	M	A	A	G	V	K	Q	L	A	D	D	R	T	L	L	M	A	G	V	S	H	D	L	R	T	P	L	T	.	.
Query Conservation												.																																																																				.	.
Alig confidence												.																																																																				.	.
Template Conservation
Template Sequence		M	G	L	F	N	A	H	A	V	A	Q	Q	R	A	D	R	I	A	T	L	L	Q	S	F	A	D	G	Q	L	D	T	A	V	G	E	A	P	A	P	G	Y	E	R	L	Y	D	S	L	R	A	L	Q	R	Q	L	R	E	Q	R	A	E	L	Q	Q	V	E	S	L	E	A	G	L	A	E	M	S	R	Q	H	E
Template Known Secondary structure																											T	T			S	S						S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
						251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	R	I	R	L	A	T	E	M	M	S	E	Q	D	G	Y	L	A	E	S	I	N	K	D	I	E	E	C	N	A	I	I	E	Q	F	I	D	Y	L	R
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		A	G	W	I	D	Q	T	I	P	A	E	R	L	E	G	R	A	A	R	I	A	K	G	V	N	E	L	V	A	A	H	I	A	V	K	M	K	V	V	S	V	V	T
Template Known Secondary structure		T	T		T	T					G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions