 |
Job Description | P0AEJ4 | Confidence | 97.77% | Date | Thu Jan 5 11:23:28 GMT 2012 |
Rank | 56 | Aligned Residues | 79 |
% Identity | 23% | Template | c3ke6A_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:protein rv1364c/mt1410; |
PDBTitle: the crystal structure of the rsbu and rsbw domains of rv1364c from2 mycobacterium tuberculosis
|
Resolution | 2.60 Å |
|
 |
  |   |
333 | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | P | L | S | I | K | R | A | V | A | N | M | V | V | N | A | A | R | Y | G | N | G | W | . |
. |
. |
. |
. |
. |
I | K | V | S | S | G | T | E | P | N | R | A | W | F | Q | V | E | D | D | G | P | G | I | A | P | E | Q | R | K | H | L | F | Q | P | F | V | R | G | D | S | A | R | T | I | S | G | T | G | L | G | L |
Query Conservation |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Sequence |   |
D | I | A | D | I | V | H | A | I | S | E | F | V | E | N | A | V | E | H | G | Y | A | T | D | V | S | K | G | I | V | V | A | A | A | L | A | G | D | G | N | V | R | A | S | V | I | D | R | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | W | G | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | B |
|
| S |
|
| T | T |
|  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |  |  | S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | B |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
434 | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . |
  |
  |   |
407 | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | V | Q | R | I | V | D | N | H | N | G | M | L | E | L | G | T | S | E | R | G | G | L | S | I | R | A | W | L | P | V | P | V | T | R | A |
Query Conservation |   |
  |
|   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |
|   |   |   | . | . | . | . |   |   |   |   |   |   | . |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
A | M | A | E | A | L | V | S | E | A | R | . |
. |
. |
. |
I | M | H | G | A | G | . |
G | T | T | A | T | L | T | H | R | L | S | R | P | A | R |
Template Known Secondary structure |   |
 |  |  |  | T | T | S | S |  |  |  | . | . | . | . |  |  |  |  | T | T | . |  |  |  |  |  |  |  |  |  |
|  |  |  |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|  | . | . | . | . |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
499 | 500 | . | . | . | . | . | . | . | . | . | |
|
|
|
510 | . | . | . | . | . | |
. | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|