Job Description P0AEJ4 Confidence 100.00% Date Thu Jan 5 11:23:28 GMT 2012 Rank 1 Aligned Residues 276 % Identity 12% Template c3d2rB_ PDB info PDB header:transferase Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp Resolution 2.03 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	A	W	L	F	I	R	I	Q	N	R	P	L	V	D	L	E	H	A	A	L	Q	V	G	K	G	I	I	P	P	P	L	R	E	Y	G	A	S	E	V	R	S	V	T	R	A	F	N	H	M	A	A	G	V	K	Q	L	A	D	D	R	T	L	L	M	A	G	V	S	H	D	L	R	T	P	L	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	S	F	A	F	L	R	Q	E	L	P	V	R	L	A	N	I	L	K	E	I	D	I	L	P	T	Q	L	V	N	T	S	S	V	Q	L	V	K	S	W	Y	I	Q	S	L	M	D	L	V	E	F	H	E	K	S	P	D	D	Q	K	A	L	S	D	F	V	D	T	L	I	K	V	R	N	R	H	H	N	V
Template Known Secondary structure																									T	S						T	S																			G	G	G	G	S		T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		252	.	.	.	.	.													.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.								.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query Sequence		I	R	L	A	T	E	.	.	.	.	.	.	.	.	.	.	.	.	M	M	S	E	Q	D	G	Y	L	A	E	S	I	N	K	D	I	E	E	C	N	A	I	I	E	Q	F	I	D	Y	L	R	T	G	Q	E	M	P	M	.	.	.	.	.	.	.	E	M	A	D	L	N	A	V	L	G	E	V	I	A	A	E
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	T	M	A	Q	G	I	I	E	Y	K	A	C	T	V	D	P	V	T	N	Q	N	L	Q	Y	F	L	D	R	F	Y	M	N	R	I	S	T	R	M	L	M	N	Q	H	I	L	I	F	S	D	S	Q	T	G	N	P	S	H	I	G	S	I	D	P	N	C	D	V	V	A	V	V	Q	D	A	F	E	C	S
Template Known Secondary structure																			T	T	T																															S	S					T	T	S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		313	.													.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.										.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Query Sequence		S	G	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	R	E	I	E	T	A	L	Y	P	G	S	I	E	V	K	M	H	P	L	S	I	K	R	A	V	A	N	M	V	V	N	A	A	R	Y	.	.	.	.	.	.	.	.	.	G	N	G	W	I	K	V	S	S	G	T	E	P	N	R	A	W	F	Q	V
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	M	L	C	D	Q	Y	Y	L	S	S	P	E	L	K	L	T	Q	V	N	G	K	F	P	D	Q	P	I	H	I	V	Y	V	P	S	H	L	H	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	H	Q	E	N	Q	P	S	L	T	P	I	E	V	I	V	V	L	G	K	E	D	L	T	I	K	I
Template Known Secondary structure										S												S	S	S	T	T	S																														T	T	T	S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		E	D	D	G	P	G	I	A	P	E	Q	R	K	H	L	F	Q	P	F	V	R	G	D	S	A	R	T	I	S	G	T	G	L	G	L	A	I	V	Q	R	I	V	D	N	H	N	G	M	L	E	L	G	T	S	E	R	G	G	L	S	I	R	A	W	L	P	.	V	P	V	T	R	A	Q	G	T	T
Query Conservation																																																																				.
Alig confidence																																																																				.
Template Conservation
Template Sequence		S	D	R	G	G	G	V	P	L	R	I	I	D	R	L	F	S	Y	T	Y	S	T	A	P	T	P	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	N	L	Y	S	L	S	G	Y	G	T	D	A	I	I	Y	L	K	A	L	S	S	E	S	I	E	K	L	P
Template Known Secondary structure					S					G	G	G	T	T	G	G	G	S	T	T			S	S						S	S	S														T	T									T	T	T										S	S	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions