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Job DescriptionP0AEJ4
Confidence100.00%DateThu Jan 5 11:23:28 GMT 2012
Rank3Aligned Residues272
% Identity13%Templatec2bu8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  AIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHDLRTPLT
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Template Sequence  EKTSFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHND
Template Known Secondary structure  TTS
TSTTSS

TTSTTTTTTT
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   38.40.........50.........60.........70.........80.........90.........100.........110.......
 
   251........260. ........270.........280.........290...... ...300.........
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Query Sequence  RIRLATEMMSE. . . . . . . . . . . . . QDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPM. . . . . . . . EMADLNAVLGEVI
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Template Sequence  VVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKHIGSIDPNCNVSEVVKDAY
Template Known Secondary structure 


TSSS
SS
S
S
BTTB
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   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   310.... .....320.........330.........340.........350..... ....360........
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Query Sequence  AAESG. . . . . . . . . . . . YEREIETALYPGSIEVKMHPLSIKRAVANMVVNAARYGNGW. . . . . . . . . IKVSSGTEPNRAW
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Template Sequence  DMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLILPPIKVMVALGEEDLS
Template Known Secondary structure  S



SSSTTS


TTTT
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   198.200.........210.........220.........230.........240.........250.........260.........270.......
 
   369370.........380.........390.........400.........410.........420.........430.........440......
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Query Sequence  FQVEDDGPGIAPEQRKHLFQPFVRGDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGT
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Template Sequence  IKMSDRGGGVPLRKIERLFSYMY. . . . STPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVER
Template Known Secondary structure 


GGGG
TTT....T




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   278.280.........290.........300 .........310.........320.........330.........340.........350.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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