Job Description P42624 Confidence 99.09% Date Thu Jan 5 12:01:54 GMT 2012 Rank 6 Aligned Residues 189 % Identity 16% Template d1sq4a_ SCOP info Double-stranded beta-helix RmlC-like cupins YlbA-like Resolution 2.70

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		L	L	G	Y	A	S	L	R	V	L	N	Q	E	V	L	A	P	G	A	A	F	Q	P	R	T	Y	P	.	K	V	D	I	L	N	V	I	L	D	G	E	A	E	Y	R	D	S	E	G	N	H	V	Q	A	S	A	G	E	A	L	L	L	S	T	Q	P	G	V	S	Y	S	E	H	N	L	S	K	D	K	P	L
Query Conservation																													.
Alig confidence																													.																	.																					.	.									.
Template Conservation																																														.																					.	.									.
Template Sequence		L	S	G	F	A	E	T	F	S	Q	Y	I	V	E	L	A	P	N	G	G	S	D	K	P	E	Q	D	P	N	A	E	A	V	L	F	V	V	E	G	E	L	S	L	T	.	L	Q	G	Q	V	H	A	X	Q	P	G	G	Y	A	F	I	P	P	G	A	.	.	D	Y	K	V	R	N	T	T	.	G	Q	H	T
Template Known Secondary structure		S	S	S	S			S															S	S					T	T										S						.		S	S							T	T							T	T		.	.								S	.	S	S
Template Predicted Secondary structure																																														.																					.	.									.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.		.	.	.	.
		113	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.
Predicted Secondary structure									.	.	.	.																																.	.	.	.	.	.																												.
Query SS confidence									.	.	.	.																																.	.	.	.	.	.																												.
Query Sequence		T	R	M	Q	L	W	L	.	.	.	.	D	A	C	P	Q	R	E	N	P	L	I	Q	K	L	A	L	N	M	G	K	Q	Q	L	I	A	S	P	E	G	A	M	.	.	.	.	.	.	G	S	L	Q	L	R	Q	Q	V	W	L	H	H	I	V	L	D	K	G	E	S	A	N	F	Q	L	H	.	G	P	R	A
Query Conservation									.	.	.	.																																.	.	.	.	.	.																												.
Alig confidence					.	.			.	.	.	.																																.	.	.	.	.	.																												.
Template Conservation					.	.
Template Sequence		R	F	H	.	.	W	I	R	K	H	Y	Q	K	V	D	G	V	P	L	P	E	A	F	V	T	N	E	Q	D	I	Q	P	L	V	X	P	D	T	E	G	R	W	S	T	T	R	F	V	D	X	S	D	X	R	H	D	X	H	V	N	I	V	N	F	E	P	G	G	V	I	P	F	A	E	T	H	V	X	E	H
Template Known Secondary structure					.	.										T	T											G	G	G	S						S	S	G	G	G							S	S		T	T		T	T		S										S	S	S			S						S
Template Predicted Secondary structure					.	.
Template SS confidence
		137	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		Y	L	Q	S	I	H	G	K	F	H	A	L	T	H	H	E	E	K	A	A	L	T	C	G	D	G	A	F	I	R	D	E	A	N	I	T	L	V	A	.	.	D	S	P	L	R	A	L	L	I
Query Conservation																																									.	.
Alig confidence																	.																								.	.
Template Conservation																	.
Template Sequence		G	L	Y	V	L	E	G	K	A	V	Y	R	L	N	Q	.	D	W	V	E	V	E	A	G	D	F	X	W	L	R	A	F	C	P	Q	A	C	Y	S	G	G	P	G	R	F	R	Y	L	L	Y
Template Known Secondary structure															T	T	.							T	T								S									S	S	S
Template Predicted Secondary structure																	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions