Job Description P42624 Confidence 99.00% Date Thu Jan 5 12:01:54 GMT 2012 Rank 7 Aligned Residues 185 % Identity 11% Template d1sefa_ SCOP info Double-stranded beta-helix RmlC-like cupins YlbA-like Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		G	Y	A	S	L	R	V	L	N	Q	E	V	L	A	P	G	A	A	F	Q	P	.	R	T	Y	P	K	V	D	I	L	N	V	I	L	D	G	E	A	E	Y	R	D	S	E	G	N	H	V	Q	A	S	A	G	E	A	L	L	L	S	T	Q	P	G	V	S	Y	S	E	H	N	L	S	K	D	K	P	L	T	R
Query Conservation																							.
Alig confidence									.	.	.	.											.																					.																					.	.									.
Template Conservation									.	.	.	.																																.																					.	.									.
Template Sequence		T	F	V	D	Y	I	A	.	.	.	.	T	F	H	K	N	G	Q	Q	T	T	G	F	G	G	D	G	I	Q	T	L	V	Y	V	I	D	G	R	L	R	V	S	.	D	G	Q	E	T	H	E	L	E	A	G	G	Y	A	Y	F	T	P	E	M	.	.	K	M	Y	L	A	N	A	Q	.	E	A	D	T	E	V
Template Known Secondary structure		S	S						.	.	.	.										S		S	S	B	T	T										S						.		S	S							T	T							T	T	S	.	.							S	S	.	S	S
Template Predicted Secondary structure									.	.	.	.																																.																					.	.									.
Template SS confidence
		61	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.		.	.	.	130	.	.
		115	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																																.	.	.	.																									.
Query SS confidence							.																																.	.	.	.																									.
Query Sequence		M	Q	L	W	L	.	D	A	C	P	Q	R	E	N	P	L	I	Q	K	L	A	L	N	M	G	K	Q	Q	L	I	A	S	P	E	G	A	M	.	.	.	.	G	S	L	Q	L	R	Q	Q	V	W	L	H	H	I	V	L	D	K	G	E	S	A	N	F	.	Q	L	H	G	P	R	A	Y	L	Q	S	I	H	G
Query Conservation							.																																.	.	.	.																									.
Alig confidence							.																																.	.	.	.																									.
Template Conservation
Template Sequence		F	L	Y	K	K	R	Y	Q	P	L	A	G	H	Q	P	Y	K	V	V	G	S	I	H	D	Q	Q	P	E	E	Y	E	G	M	T	D	V	L	L	W	S	L	L	P	K	E	F	D	F	D	M	N	M	H	I	L	S	F	E	P	G	A	S	H	A	Y	I	E	T	H	V	Q	E	H	G	A	Y	L	I	S	G
Template Known Secondary structure												T	T										G	G	G	S					G	G	G		T	T							S		S	S	T	T		S										T	T		B		S	S		B			S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		K	F	H	A	L	T	H	H	E	E	K	A	A	L	T	C	G	D	G	A	F	I	R	D	E	A	N	I	T	L	V	A	.	.	.	D	S	P	L	R	A	L	L	I
Query Conservation																																		.	.	.
Alig confidence										.																								.	.	.
Template Conservation										.
Template Sequence		Q	G	M	Y	N	L	D	N	.	E	W	Y	P	V	E	K	G	D	Y	I	F	M	S	A	Y	V	P	Q	A	A	Y	A	V	G	R	E	E	P	L	M	Y	V	Y	S
Template Known Secondary structure								T	T	.							T	T							T	T										S	S	S
Template Predicted Secondary structure										.
Template SS confidence
		213	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions