 |
Job Description | P42624 | Confidence | 97.14% | Date | Thu Jan 5 12:01:54 GMT 2012 |
Rank | 48 | Aligned Residues | 77 |
% Identity | 10% | Template | d1lr5a_ |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 1.90 |
|
 |
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | Q | E | V | L | A | P | G | A | A | F | Q | P | R | T | Y | P | K | V | D | I | L | N | V | I | L | D | G | E | A | E | Y | R | D | S | E | G | . |
. |
. |
. |
. |
. |
. |
. |
N | H | V | Q | A | S | A | G | E | A | L | L | L | S | T | Q | P | G | V | S | Y | S | E | H | N | L | S | K | D | K | P | L | T | R |
Query Conservation |   |
  |
|
|
|   |
|   |
|
|   |
|
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|   |
|   |
|   |
|
|   |
| . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |
|
|
|
|   |
|
|
|
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|   |   |
|
|   |   | . |   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   | . | . |
|   |
|
|   |
|   |   |
|   |   |   |
|
|
|   |   |
|   |
|   |   |
Template Sequence |   |
V | W | L | Q | T | I | S | P | G | Q | R | T | P | I | H | R | H | S | C | E | E | V | F | . |
T | V | L | K | G | K | G | T | L | L | M | G | S | S | S | L | K | Y | P | G | Q | P | Q | E | I | P | F | F | Q | N | T | T | . |
. |
F | S | I | P | V | N | D | P | H | Q | V | W | N | S | D | E | H | E | D | L | Q | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T |
| B |
|
|  |  |  |  | S | S |
|  |  |  | . |  |  |  |  |
|
|  |  |  |  |  |
|
| S | S | S | S | S |
|
| S |
|  |  |  |  |  |
| T | T |
|  | . | . |  |  |  |
| T | T |
|
|  |  |  |  |
|
|
| S | S | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  | . |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
  |   |
115 | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | L | W | L | D | A | C |
Query Conservation |   |
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|
|
Template Sequence |   |
L | V | I | I | S | R | P | P |
Template Known Secondary structure |   |
 |  |  |  |  | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
120 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|