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Job DescriptionP42624
Confidence98.91%DateThu Jan 5 12:01:54 GMT 2012
Rank12Aligned Residues164
% Identity15%Templatec3rnsA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.........100.........110.........120......
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Query Sequence  VLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDACPQRE
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Template Sequence  SLAKDEEITAEAXLG. NRYYYCFNGNGEIF. IENNKKTISNGDFLEITA. . NHNYSIEAR. . . DNLKLIEIGEKISAFNL
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   40.........50.... .....60........ .70.........80...... ...90..... ....100.........110..
 
   127..130.........140.........150.........160.........170.........180.........190.........200......
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Query Sequence  NPLIQKLALNMGKQQLIASPEGAMGSLQLRQQVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGD
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Template Sequence  AEVVEYQEGKIVSKNLVAKPN. . . . . . . . . . . LVXTIXSFWKGESLDPHKAPGDALVTVLDGEGKYYVDG. KPFIVKKGE
Template Known Secondary structure  GGGS


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   129130.........140......... 150.........160.........170.........180....... ..190......
 
   207..210.........220.........
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Query Sequence  GAFIRDEANITLVADSPLRALLI
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Template Sequence  SAVLPANIPHAVEAETENFKXLL
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   197..200.........210.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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