Job Description P42624 Confidence 98.06% Date Thu Jan 5 12:01:54 GMT 2012 Rank 23 Aligned Residues 158 % Identity 13% Template c3myxA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pspto_0244; PDBTitle: crystal structure of a pspto_0244 (protein with unknown function which2 belongs to pfam duf861 family) from pseudomonas syringae pv. tomato3 str. dc3000 at 1.30 a resolution Resolution 1.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																			.																																								.	.	.	.	.	.	.
Query SS confidence																																			.																																								.	.	.	.	.	.	.
Query Sequence		L	N	V	I	L	D	G	E	A	E	Y	R	D	S	E	G	N	H	V	Q	A	S	A	G	E	A	L	L	L	S	T	Q	P	.	G	V	S	Y	S	E	H	N	L	S	K	D	K	P	L	T	R	M	Q	L	W	L	D	A	C	P	Q	R	E	N	P	L	I	Q	K	L	A	L	N	.	.	.	.	.	.	.
Query Conservation																																			.																																								.	.	.	.	.	.	.
Alig confidence																.																			.							.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																.																										.	.	.	.	.	.
Template Sequence		X	L	V	X	H	R	G	S	V	T	L	T	S	G	.	T	D	S	V	T	L	S	T	G	E	S	A	V	I	G	R	G	T	Q	V	R	I	D	A	Q	.	.	.	.	.	.	P	E	S	L	W	A	F	C	A	S	T	Q	A	S	G	P	D	K	S	G	I	T	A	L	D	R	L	A	L	L	T	P	S	S
Template Known Secondary structure								S							T	.	T							T	T							T	T									.	.	.	.	.	.	T	T										S			S					S						T	T
Template Predicted Secondary structure																.																										.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.							.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
				137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure		.	.																																										.
Query SS confidence		.	.																																										.
Query Sequence		.	.	M	G	K	Q	Q	L	I	A	S	P	E	G	A	M	G	S	L	Q	L	R	Q	Q	V	W	L	H	H	I	V	L	D	K	G	E	S	A	N	F	Q	L	H	.	G	P	R	A	Y	L	Q	S	I	H	G	K	F	H	A	L	T	H	H	E	E	K	A	A	L	T	C	G	D	G	A	F	I	R	D	E
Query Conservation		.	.																																										.
Alig confidence		.	.																																										.
Template Conservation
Template Sequence		P	P	D	P	S	I	X	I	S	P	L	P	Q	C	R	S	N	N	L	F	E	D	T	A	S	T	L	R	I	G	V	W	D	S	T	P	Y	E	R	I	S	R	P	H	K	I	H	E	L	X	N	L	I	E	G	R	V	V	L	S	L	E	N	G	S	S	L	T	V	N	T	G	D	T	V	F	V	A	Q	G
Template Known Secondary structure					G	G	G	B	S	S														S	S	S	S													B						S	S																T	T	S							T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	I	T	L	V	A	D	S	P	L	R	A	L	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	C	K	W	T	S	T	G	Y	V	R	K	F	Y	A
Template Known Secondary structure									S	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions