Job Description P42624 Confidence 97.09% Date Thu Jan 5 12:01:54 GMT 2012 Rank 49 Aligned Residues 196 % Identity 18% Template c3c3vA_ PDB info PDB header:allergen Chain: A: PDB Molecule:arachin arah3 isoform; PDBTitle: crystal structure of peanut major allergen ara h 3 Resolution 1.73 Å

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		28	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																				.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure												.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	F	D	P	K	L	L	G	Y	.	.	.	A	S	L	R	V	L	N	Q	E	V	L	A	P	G	A	A	F	Q	P	R	T	Y	P	K	V	D	I	L	N	V	I	L	D	G	E	A	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	S	E	G	N	H	V	Q	A
Query Conservation												.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.		.	.																		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.																		.
Template Sequence		E	T	W	N	P	N	N	Q	E	F	E	C	A	G	.	.	V	A	L	S	R	L	V	L	R	R	N	A	L	R	R	P	F	.	Y	S	N	A	P	Q	E	I	F	I	Q	Q	G	R	G	Y	F	G	L	I	F	P	G	C	P	S	T	Y	E	E	P	A	Q	Q	Q	Q	Q	D	S	H	Q	K	V	H	R	F
Template Known Secondary structure						T	T	S							T	.	.										T	T							.			S	S																		T	T																		S
Template Predicted Secondary structure																.	.																		.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																											.																.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence																																											.																.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		S	A	G	E	A	L	L	L	S	T	Q	P	G	V	S	Y	S	E	H	N	L	S	K	D	K	P	L	T	R	M	Q	L	W	L	D	A	C	P	Q	R	E	.	N	P	L	I	Q	K	L	A	L	N	M	G	K	Q	Q	.	.	.	.	.	.	.	.	L	I	A	S	P	E	G	A	M	G	.	.	.	.	.
Query Conservation																																											.																.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence														.	.							.																					.																.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation														.	.							.
Template Sequence		N	E	G	D	L	I	A	V	P	T	G	V	.	.	A	F	W	L	Y	N	.	D	H	D	T	D	V	V	A	V	S	L	T	D	T	N	N	N	D	N	Q	L	D	Q	F	P	R	R	F	N	L	A	G	N	H	E	Q	E	F	L	R	Y	Q	Q	G	N	I	F	S	G	F	T	P	E	F	L	A	Q	A	F
Template Known Secondary structure			T	T							T	T		.	.							.		S	S	S										T	T	B	T	T			S		S							S	S						T	T	G	G	G					T	G	G	G	S
Template Predicted Secondary structure														.	.							.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
																																																																												152	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	Q	L	R	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	D	D	R	Q	I	V	Q	N	L	R	G	E	N	E	S	E	E	Q	G	A	I	V	T	V	R	G	G	L	R	I	L	S	P	G	I	E	E	T	I	C	T	A	T	V	K	K	N	I	G	R	N	R	S	P	D	I	Y	N	P	Q	A	G	S	L	K	T	A	N	E	L	N	L	L	I	L	R	W	L
Template Known Secondary structure		T											T	T	T	T			T	T	S		S					T	T									T	T	T	T	G	G	G								S	S		S			S				T	T	T								T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																	.	.	.	.	.																														.
Query SS confidence																					.																	.	.	.	.	.																														.
Query Sequence		Q	V	W	L	H	H	I	V	L	D	K	G	E	S	A	N	F	Q	L	.	H	G	P	R	A	Y	L	Q	S	I	H	G	K	F	H	A	.	.	.	.	.	L	T	H	H	E	E	K	A	A	L	T	C	G	D	G	A	F	I	R	D	E	A	N	I	T	L	V	A	D	.	S	P	L	R	A	L	L	I
Query Conservation																					.																	.	.	.	.	.																														.
Alig confidence																					.																	.	.	.	.	.																														.
Template Conservation
Template Sequence		G	L	S	A	E	Y	G	N	L	Y	R	N	A	L	F	V	P	H	Y	N	T	N	A	H	S	I	I	Y	A	L	R	G	R	A	H	V	Q	V	V	D	S	N	G	N	R	V	Y	D	E	E	L	Q	E	G	H	V	L	V	V	P	Q	N	F	A	V	A	G	K	S	Q	S	D	N	F	E	Y	V	A	F
Template Known Secondary structure		T										T	T									S	S										S									T	T	S										T	T							T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions