Return to main results Retrieve Phyre Job Id

Job DescriptionP42624
Confidence96.61%DateThu Jan 5 12:01:54 GMT 2012
Rank59Aligned Residues49
% Identity27%Templatec3bcwB_
PDB info PDB header:unknown functionChain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a duf861 family protein with a rmlc-like cupin2 fold (bb1179) from bordetella bronchiseptica rb50 at 1.60 a3 resolution
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.......
Predicted Secondary structure 
























Query SS confidence 


















































Query Sequence  VLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQP
Query Conservation   
 

 

  




 






 
 
 
 

 

   
  



 



 
Alig confidence 





.











.






























Template Conservation     

 .         
  . 



   
   

    
 


    
 
 
Template Sequence  ESTSGS. FQSNTTGYIEYC. HIIEGEARLVDPDGTVHAVKAGDAFIXPEGY
Template Known Secondary structure  .


TT.
TT

TT

TT
Template Predicted Secondary structure 



.






.












Template SS confidence 


















































   54..... 60.........70. ........80.........90.........100..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions