 |
Job Description | P42624 | Confidence | 97.71% | Date | Thu Jan 5 12:01:54 GMT 2012 |
Rank | 31 | Aligned Residues | 85 |
% Identity | 15% | Template | c2vpvA_ |
PDB info |
PDB header:cell cycle | Chain: A: PDB Molecule:protein mif2; |
PDBTitle: dimerization domain of mif2p
|
Resolution | 2.7 Å |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | F | S | F | G | H | Y | F | D | P | K | L | L | G | Y | A | S | L | R | V | L | N | Q | E | V | L | A | P | G | A | A | F | Q | P | R | T | Y | P | . |
K | V | D | I | L | N | V | I | L | D | G | E | A | E | Y | R | D | S | E | G | N | H | V | Q | A | S | A | G | E | A | L | L | L | S | T | Q | P | G | V | S | Y |
Query Conservation |   |
  |
|
|
|   |   |
|   |
|
|   |   |   |   |
|
|   |
|
|
|   |
|
|
|   |
|   |
|
|   |
|
|   |   |
|
|
|
| . |
|   |
|
|
|
|
|
|
|   |
|   |
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |
|
|
|
|   |
|
|
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   | . | . | . | . |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   | . |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |
|   | . | . |   |
|
Template Sequence |   |
N | F | A | L | E | I | M | F | D | K | H | K | E | Y | F | A | S | G | I | L | K | . |
. |
. |
. |
L | P | A | I | S | G | Q | K | K | L | S | N | S | F | R | T | Y | I | T | F | H | V | I | Q | G | I | V | E | V | T | V | C | . |
K | N | K | F | L | S | V | K | G | S | T | F | Q | I | P | A | F | N | . |
. |
E | Y |
Template Known Secondary structure |   |
B |
|
|
|
|  |  |
|
| T | T | T |
| S |
|  |  |  |  |  |  | . | . | . | . |  |
| S | S | G | G | G |
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  | T | . | T |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T | T |
| . | . |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
| . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
438 | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | |
|
|
|
. | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | |
. | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | |
|
. | 510 |
  |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | H | N | L | S | K | D | K | P | L | T | R | M |
Query Conservation |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
| . |   |
|   |
|   |
|   |
Template Sequence |   |
A | I | A | N | R | G | . |
N | D | E | A | K | M | F |
Template Known Secondary structure |   |
 |  |  |  |
| S | . | S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
| . |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
511 | . | . | . | . | . | |
. | . | . | 520 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|