Return to main results Retrieve Phyre Job Id

Job DescriptionP45505
Confidence39.05%DateThu Jan 5 12:02:50 GMT 2012
Rank5Aligned Residues64
% Identity19%Templatec2f7cA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:hth-type transcriptional regulator catm; PDBTitle: catm effector binding domain with its effector cis,cis-muconate
Resolution2.16 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30 .........40.........50.........60....
Predicted Secondary structure 








.







Query SS confidence 





























.

































Query Sequence  MNFIRQGLGIALQPELTLKSIAGELCSVPL. EPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVA
Query Conservation    









 





 

 






.



























 



 
Alig confidence 





























.

































Template Conservation     
  
 

   
          
   

          
       

    
   
      
Template Sequence  LGLVAAGEGVCIVPASAMDIGVKNLLYIPILDDDAYSPISLAVRNMDHSNYIPKILACVQEVFAT
Template Known Secondary structure  TS
GGGGGSS
SSB
STT
TT


T
Template Predicted Secondary structure 























Template SS confidence 
































































   231........240.........250.........260.........270.........280.........290.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions