Return to main results Retrieve Phyre Job Id

Job DescriptionP45505
Confidence18.52%DateThu Jan 5 12:02:50 GMT 2012
Rank12Aligned Residues32
% Identity6%Templatec1iz1B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:lysr-type regulatory protein; PDBTitle: crystal structure of cbnr, a lysr family transcriptional2 regulator
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30..
Predicted Secondary structure 









Query SS confidence 































Query Sequence  MNFIRQGLGIALQPELTLKSIAGELCSVPLEP
Query Conservation    









 





 

 








Alig confidence 































Template Conservation     
  
 

  

               
  
Template Sequence  LALTMAGAASSIVPASVAAIRWPDIAFARIVG
Template Known Secondary structure  TTS
S

TT

Template Predicted Secondary structure 






Template SS confidence 































   230.........240.........250.........260.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions