 |
Job Description | P77757 | Confidence | 40.42% | Date | Thu Jan 5 12:32:37 GMT 2012 |
Rank | 64 | Aligned Residues | 87 |
% Identity | 14% | Template | d2aifa1 |
SCOP info | Bacillus chorismate mutase-like
| L30e-like
| L30e/L7ae ribosomal proteins
|
Resolution | 1.90 |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | E | L | I | R | R | T | T | T | A | C | E | S | L | G | K | E | Y | E | I | L | L | I | D | D | G | S | S | D | N | S | A | H | M | L | V | E | A | S | Q | A | E | N | S | H | I | V | S | I | L | L | N | R | N | Y | G | Q | H | S | A | I | M | A | G | F | S | H | V | T | G | D | L | I | I | T | L | D | A | D |
Query Conservation |   |
|   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|   |   |
|
|   |   |
| . | . | . | . | . |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |   | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
A | N | E | A | T | K | A | L | N | R | G | I | A | E | I | . |
. |
. |
. |
. |
V | L | L | A | A | D | A | E | P | L | E | I | L | L | H | L | P | L | V | C | E | D | K | N | T | P | Y | V | F | V | R | S | K | V | A | L | G | R | A | C | G | V | S | . |
. |
. |
. |
. |
R | P | V | I | A | A | A | I | T | S | K | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|  |  |  | . | . | . | . | . |  |  |  |  | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S |
|  |  |  |  |  |  |  | T | T |
| S | . | . | . | . | . | S |
|
| S |  |  |  |  |  |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . |
  |
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | N | P | P | E | E | I | P | R | L | V | A | K | A | D | E |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
Template Sequence |   |
G | S | S | L | S | S | Q | I | T | E | L | K | D | Q | I | E | Q |
Template Known Secondary structure |   |
T |
| T | T |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|