Job Description P77757 Confidence 94.98% Date Thu Jan 5 12:32:37 GMT 2012 Rank 22 Aligned Residues 165 % Identity 10% Template d1vh3a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.70

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		L	P	E	L	I	R	R	T	T	T	A	C	E	S	L	G	K	E	Y	E	I	L	L	I	D	D	G	S	S	D	N	S	A	H	M	L	V	E	A	S	Q	A	E	N	S	H	I	V	S	I	L	L	N	R	N	Y	G	Q	H	S	A	I	M	A	G	F	S	H	V	.	.	T	G	D	L	I	I	T	L	D
Query Conservation																																																																							.	.
Alig confidence													.	.	.						.							.	.	.	.	.	.	.																																					.	.
Template Conservation													.	.	.						.							.	.	.	.	.	.	.
Template Sequence		I	Q	H	V	F	E	K	A	L	Q	S	.	.	.	G	A	S	R	V	.	I	I	A	T	D	N	.	.	.	.	.	.	.	E	N	V	A	D	V	A	K	S	F	G	A	E	V	C	X	T	S	V	N	H	N	S	G	T	E	R	L	A	E	V	V	E	K	L	A	I	P	D	N	E	I	I	V	N	I	Q
Template Known Secondary structure												T	.	.	.	T		S			.					S		.	.	.	.	.	.	.										T	T								S			S	S												T	T			T	T	S
Template Predicted Secondary structure													.	.	.						.							.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.		.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		101	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																										.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure					.																.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	L	.	Q	N	P	P	E	E	I	P	R	L	V	A	K	A	D	.	E	G	Y	D	V	V	G	T	V	R	Q	N	R	Q	D	S	W	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	A	S	K	M	I	N	R	L	I	Q	R	T	T	G
Query Conservation					.																.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	E	P	L	I	P	P	V	I	V	R	Q	V	A	D	N	L	A	K	F	N	V	N	X	A	S	L	A	V	K	I	H	D	A	E	E	L	F	N	P	N	A	V	K	V	L	T	D	K	D	G	Y	V	L	Y	F	S	R	S	V	I	P	Y	D	R	D	Q	F	X	N	L	Q	D	V	Q	K	V	Q	L
Template Known Secondary structure		T	T		S																	T	T		S															T		T	T	S							T	T	S	B						S	S		S	S							T	T				T	T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		K	A	M	G	D	Y	G	C	M	L	R	A	Y	R	R	H	I	V	D	A	M	L	H	C	H	E	R	S	T	F	I	P	.	.	.	.	.	I	L	A	N	I	F	A	R	R	A	I	E	I
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.
Template Conservation
Template Sequence		S	D	A	Y	L	R	H	I	G	I	Y	A	Y	R	A	G	F	I	K	Q	Y	V	Q	W	A	P	T	Q	L	E	N	L	E	K	L	E	Q	L	R	V	L	Y	N	G	E	R	I	H	V	E
Template Known Secondary structure			S																						S										T		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions