Job Description P77757 Confidence 100.00% Date Thu Jan 5 12:32:37 GMT 2012 Rank 4 Aligned Residues 192 % Identity 17% Template c2ffuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2; PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2 Resolution 1.64 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																			.																						.	.
Query SS confidence																			.																						.	.
Query Sequence		I	H	P	V	K	K	V	S	V	V	I	P	V	Y	N	E	Q	.	E	S	L	P	E	L	I	R	R	T	T	T	A	C	E	S	L	G	K	E	Y	.	.	E	I	L	L	I	D	D	G	S	S	D	N	S	A	H	M	L	V	E	A	S	Q	A	E	N	S	H	I	V	S	I	L	L	N	R	N	Y	G	Q
Query Conservation																			.																						.	.
Alig confidence																			.											.	.	.									.	.																					.	.	.	.
Template Conservation																														.	.	.																															.	.	.	.
Template Sequence		R	V	D	L	P	A	T	S	V	V	I	T	F	H	N	E	A	R	S	A	L	L	R	T	V	V	S	V	.	.	.	L	K	K	S	P	P	H	L	I	K	E	I	I	L	V	D	D	Y	S	N	D	P	E	D	G	A	L	L	G	K	.	.	.	.	I	E	K	V	R	V	L	R	N	D	R	R	E	G	L
Template Known Secondary structure			S	S											S	S														.	.	.				S		G	G	G										S		S		T					G	G	G	G	.	.	.	.	B	T	T							S	S
Template Predicted Secondary structure																														.	.	.																															.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																								130	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	S	A	I	M	A	G	F	S	H	V	T	G	D	L	I	I	T	L	D	A	D	L	Q	N	P	P	E	E	I	P	R	L	V	A	K	A	D	E	G	Y	D	V	V	G	T	V	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	Q	D	S	W	F	R
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	R	S	R	V	R	G	A	D	A	A	Q	A	K	V	L	T	F	L	D	S	H	C	E	C	N	E	H	W	L	E	P	L	L	E	R	V	A	E	D	R	T	R	V	V	S	P	I	I	D	V	I	N	M	D	N	F	Q	Y	V	G	A	S	A	D	L	K	G	G	F	D	W	N	L	V	F	K	W	D	Y
Template Known Secondary structure														S	S							S	S					T	T													T	T												T	T	T								S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.
Query Sequence		K	T	A	S	K	M	I	N	R	L	I	Q	R	T	T	G	K	A	M	G	D	Y	G	C	M	L	R	A	Y	R	R	H	I	V	D	A	M	L	H	C	H	E	R	.	.	.	.	.	.	.	S	T	F	I	P	I	L	A	N	I	F	A	R	R	A	I	E	I	P	V	H	H
Query Conservation																																													.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	T	P	E	Q	R	R	S	R	Q	G	N	P	V	A	P	I	K	T	P	M	I	A	G	G	L	F	V	M	D	K	F	Y	F	E	E	L	G	K	Y	D	M	M	M	D	V	W	G	G	E	N	L	E	I	S	F	R	V	W	Q	C	G	G	S	L	E	I	I	P	C	S	R
Template Known Secondary structure										T	S	S		T	T	S					S	S			S	S	S											T	T				T	T			S	S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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