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Job DescriptionP77757
Confidence99.98%DateThu Jan 5 12:32:37 GMT 2012
Rank5Aligned Residues196
% Identity18%Templatec2d7iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20 .........30.........40. ........50.........60.........70.........80
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Query Sequence  IHPVKKVSVVIPVYNEQ. ESLPELIRRTTTACESLGKEY. . EILLIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQ
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Template Sequence  LETLPNTSIIIPFHNEGWSSLLRTVHSV. . . LNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGL
Template Known Secondary structure  SS


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GGG
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GGGTTTSTT
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   141........150.........160........ .170.........180.........190.........200.........210.......
 
   81........90.........100.........110.........120...... ...130.........
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Query Sequence  HSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGT. . . . . . . . . . . . . . . . . . . . . VRQNRQDSWFRKT
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Template Sequence  IRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRI
Template Known Secondary structure 

SS

SS
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TTSS

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   218.220.........230.........240.........250.........260.........270.........280.........290.......
 
   140.........150.........160.........170.........180 .........190.........200..
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Query Sequence  ASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHER. . . . . . . STFIPILANIFARRAIEIPVHH
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Template Sequence  PIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSR
Template Known Secondary structure 


TTT

SSTTS

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SSSTTSS
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   298.300.........310.........320.........330.........340.........350.........360.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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