Job Description P77757 Confidence 45.14% Date Thu Jan 5 12:32:37 GMT 2012 Rank 57 Aligned Residues 83 % Identity 19% Template c2c0nA_ PDB info PDB header:viral protein/transferase Chain: A: PDB Molecule:a197; PDBTitle: crystal structure of a197 from stiv Resolution 1.86 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		S	S	D	N	S	A	H	M	L	V	E	A	S	Q	A	E	N	S	H	I	V	S	I	L	L	N	R	N	Y	G	Q	H	S	.	.	A	I	M	A	G	F	S	H	V	T	G	D	L	I	I	T	L	D	A	D	L	Q	N	P	P	E	E	I	P	R	L	V	A	K	A	D	E	G	Y	D	V	V	G	T	V
Query Conservation																																			.	.
Alig confidence																																			.	.
Template Conservation
Template Sequence		S	X	G	S	V	R	L	P	L	I	D	F	L	V	K	N	D	I	E	Y	V	I	L	S	R	R	N	H	V	A	V	Q	R	E	I	A	L	D	X	F	L	E	X	K	D	Y	D	T	L	A	F	L	D	E	D	V	V	P	I	E	I	D	F	Q	K	V	E	A	K	F	N	E	G	Y	D	V	V	C	G	Y
Template Known Secondary structure			S	S													T	T										S																	T	T									T	T																		T		S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		128	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	N	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Y	L	K	T
Template Known Secondary structure			B		T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions