Job Description P77757 Confidence 100.00% Date Thu Jan 5 12:32:37 GMT 2012 Rank 1 Aligned Residues 196 % Identity 18% Template c1xhbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1; PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1 Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																						.	.															.
Query SS confidence																			.																						.	.															.
Query Sequence		I	H	P	V	K	K	V	S	V	V	I	P	V	Y	N	E	Q	.	E	S	L	P	E	L	I	R	R	T	T	T	A	C	E	S	L	G	K	E	Y	.	.	E	I	L	L	I	D	D	G	S	S	D	N	S	A	.	H	M	L	V	E	A	S	Q	A	E	N	S	H	I	V	S	I	L	L	N	R	N	Y	G
Query Conservation																			.																						.	.															.
Alig confidence																			.											.	.	.									.	.															.
Template Conservation																														.	.	.
Template Sequence		P	D	N	L	P	T	T	S	V	V	I	V	F	H	N	E	A	W	S	T	L	L	R	T	V	H	S	V	.	.	.	I	N	R	S	P	R	H	M	I	E	E	I	V	L	V	D	D	A	S	E	R	D	F	L	K	R	P	L	E	S	Y	V	K	K	L	K	V	P	V	H	V	I	R	M	E	Q	R	S	G
Template Known Secondary structure			S												S	S														.	.	.			S	S		G	G	G										S				G	G	G	T									S	S	S	S								S	S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																								130	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	H	S	A	I	M	A	G	F	S	H	V	T	G	D	L	I	I	T	L	D	A	D	L	Q	N	P	P	E	E	I	P	R	L	V	A	K	A	D	E	G	Y	D	V	V	G	T	V	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	Q	D	S	W	F
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	R	A	R	L	K	G	A	A	V	S	R	G	Q	V	I	T	F	L	D	A	H	C	E	C	T	A	G	W	L	E	P	L	L	A	R	I	K	H	D	R	R	T	V	V	C	P	I	I	D	V	I	S	D	D	T	F	E	Y	M	A	G	S	D	M	T	Y	G	G	F	N	W	K	L	N	F	R	W	Y
Template Known Secondary structure															S	S							S	S					T	T													T	T												S	S	S								T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		R	K	T	A	S	K	M	I	N	R	L	I	Q	R	T	T	G	K	A	M	G	D	Y	G	C	M	L	R	A	Y	R	R	H	I	V	D	A	M	L	H	C	H	E	R	.	.	.	.	.	.	.	S	T	F	I	P	I	L	A	N	I	F	A	R	R	A	I	E	I	P	V	H	H
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	P	Q	R	E	M	D	R	R	K	G	D	R	T	L	P	V	R	T	P	T	M	A	G	G	L	F	S	I	D	R	D	Y	F	Q	E	I	G	T	Y	D	A	G	M	D	I	W	G	G	E	N	L	E	I	S	F	R	I	W	Q	C	G	G	T	L	E	I	V	T	C	S	H
Template Known Secondary structure											T	T	T		T	T	S					S	B			S	S	S											T	T	S			T	T	S		T	T					S									T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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