Job Description P0AAG5 Confidence 99.96% Date Thu Jan 5 11:12:52 GMT 2012 Rank 60 Aligned Residues 317 % Identity 22% Template d2hyda2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.00

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		L	K	R	L	L	A	Y	G	S	P	W	R	K	P	L	G	I	A	V	L	M	M	W	V	A	A	A	A	E	V	S	G	P	L	L	I	S	Y	F	I	D	N	M	V	A	K	N	N	L	P	L	K	V	.	.	.	.	.	V	A	G	L	A	A	A	Y	V	G	L	Q	L	F	A	A	G	L	H	Y	A	Q
Query Conservation																																																							.	.	.	.	.
Alig confidence																																																							.	.	.	.	.
Template Conservation
Template Sequence		I	K	R	Y	L	Q	F	V	K	P	Y	K	Y	R	I	F	A	T	I	I	V	G	I	I	K	F	G	I	P	M	L	I	P	L	L	I	K	Y	A	I	D	G	V	I	N	N	H	A	L	T	T	D	E	K	V	H	H	L	T	I	A	I	G	I	A	L	F	I	F	V	I	V	R	P	P	I	E	F	I	R
Template Known Secondary structure										G	G	G													T	T	T																		T	T		S	S																								T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	F	N	R	A	A	V	G	V	V	Q	Q	L	R	T	D	V	M	D	A	A	L	R	Q	P	L	S	E	F	D	T	Q	P	V	G	Q	V	I	S	R	V	T	N	D	T	E	V	I	R	D	L	Y	V	T	V	V	A	T	V	L	R	S	A	A	L	V	G	A	M	L	V	A	M	F	S	L	D	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	L	A	Q	W	T	S	N	K	I	L	Y	D	I	R	K	K	L	Y	N	H	L	Q	A	L	S	A	R	F	Y	A	N	N	Q	V	G	Q	V	I	S	R	V	I	N	D	V	E	Q	T	K	D	F	I	L	T	G	L	M	N	I	W	L	D	C	I	T	I	I	I	A	L	S	I	M	F	F	L	D	V
Template Known Secondary structure																											S							T	S																T																														T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	A	L	V	A	I	M	I	F	P	V	V	L	V	V	M	V	I	Y	Q	R	Y	S	T	P	I	V	R	R	V	R	A	Y	L	A	D	I	N	D	G	F	N	E	I	I	N	G	M	S	V	I	Q	Q	F	R	Q	Q	A	R	F	G	E	R	M	G	E	A	S	R	S	H	Y	M	A	R	M	Q	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	T	L	A	A	L	F	I	F	P	F	Y	I	L	T	V	Y	V	F	F	G	R	L	R	K	L	T	R	E	R	S	Q	A	L	A	E	V	Q	G	F	L	H	E	R	V	Q	G	I	S	V	V	K	S	F	A	I	E	D	N	E	A	K	N	F	D	K	K	N	T	N	F	L	T	R	A	L	K	H	T
Template Known Secondary structure		T	T					T	T																																															T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	D	G	F	L	L	R	P	L	L	S	L	F	S	S	L	I	L	C	G	L	L	M	L	F	G	F	S	A	S	G	T	I	E	V	G	V	L	Y	A	F	I	S	Y	L	G	R	L	N	E	P	L	I	E	L	T	T	Q	Q	A	M	L	Q	Q	A	V	V	A	G	E	R	V	F	E	L	M	D	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	W	N	A	Y	S	F	A	A	I	N	T	V	T	D	I	G	P	I	I	V	I	G	V	G	A	Y	L	A	I	S	G	S	I	T	V	G	T	L	A	A	F	V	G	Y	L	E	L	L	F	G	P	L	R	R	L	V	A	S	F	T	T	L	T	Q	S	F	A	S	M	D	R	V	F	Q	L	I	D	E	D
Template Known Secondary structure																																	T	S												T					T	T																											T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		326	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		322	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions