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Job DescriptionP0AAG5
Confidence99.80%DateThu Jan 5 11:12:52 GMT 2012
Rank63Aligned Residues275
% Identity21%Templated1pf4a2
SCOP infoABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region
Resolution3.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  WPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVAKNNLPLKVVAGLAAAYVGLQLFAAGLHYAQSL
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Template Sequence  WQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESN. . FLRILPFMILGLMFVRGLSGFASSY
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   10.........20.........30.........40.........50.........60.. .......70.........80.......
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  LFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRM
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Template Sequence  CLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQL
Template Known Secondary structure  TTTGGGTTT
SSTT



GGGTTGGGGGGS


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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   168.170.........180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  ALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRL
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Template Sequence  SLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RQQTMKLVSA
Template Known Secondary structure  GGGTTGGGGTT

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   168.170.........180.........190.........200.. .......210..
 
   248.250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  DGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVF
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Template Sequence  QSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLF
Template Known Secondary structure  GGGTTGGGGTSS




GGGGGGTTTTTGGGGGSST





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   248.250.........260.........270.........280.........290.........300.........310.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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