Job Description P0AAG5 Confidence 92.99% Date Thu Jan 5 11:12:52 GMT 2012 Rank 357 Aligned Residues 132 % Identity 19% Template c3kx2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp Resolution 2.20 Å

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		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.				.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		V	P	S	R	N	F	V	A	L	V	G	H	T	G	S	G	K	S	T	L	A	S	L	L	M	.	.	.	G	Y	Y	P	L	T	E	G	E	I	R	L	D	G	R	P	L	S	S	L	S	H	S	A	L	R	Q	G	V	A	M	V	Q	Q	D	P	V	V	L	A	D	T	F	L	A	N	V	T	L	G	R	D
Query Conservation																											.	.	.
Alig confidence																											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	N	N	Q	I	M	V	F	V	G	E	T	G	S	G	K	T	T	Q	I	P	Q	F	V	L	F	D	E	M	P	H	L	E	N	T	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	C	T	Q	P	R	R	V	A	A	M	S	V	A	Q	R	V	A	E	E	M	D
Template Known Secondary structure						S								T	T	S	S															G	G	G	G	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S																T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.																					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.							.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.		.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.																												.
Query SS confidence																																						.	.	.	.	.	.																												.
Query Sequence		I	S	E	E	R	V	W	Q	A	L	E	T	V	Q	L	A	E	L	A	R	S	M	S	D	G	I	Y	T	P	L	G	E	Q	G	N	N	.	.	.	.	.	.	L	S	V	G	Q	K	Q	L	L	A	L	A	R	V	L	V	E	T	P	Q	I	L	I	L	D	E	A	.	T	A	S	I	D	S	G	T	E	Q
Query Conservation																																						.	.	.	.	.	.																												.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																												.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	V	G	Y	S	I	R	F	E	N	K	T	S	N	K	T	I	L	K	Y	M	T	D	G	M	L	L	R	E	A	M	E	D	H	D	L	S	R	Y	S	C	I	I	L	D	E	A	H	E	R	T	L	A	T	D	I	L	M
Template Known Secondary structure				B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T						T	T						T	T																			T	T		T	T									G	G	G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.																		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	Q	H	A	L	A	A	V	R	E	H	T	T	L	V	V	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	L	K	Q	V	V	K	R	R	P	D	L	K	I	I	I	M	S
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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