Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAG5
Confidence100.00%DateThu Jan 5 11:12:52 GMT 2012
Rank19Aligned Residues228
% Identity28%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   335....340.........350. ........360.........370.........380.........390.........400.........410...
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Query Sequence  PLQSGTIEVDNVSFAYR. DDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSAL
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Template Sequence  WPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLL. NTEGEIQIDGVSWDSITLEQW
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   1204.....1210.........1220.........1230.........1240.........1250.........1260. ........1270.........1280..
 
   414.....420.........430.........440.........450.........460.........470.........480.........490...
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Query Sequence  RQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQALETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVE
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Template Sequence  RKAFGVIPQKVFIFSGTFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLS
Template Known Secondary structure  GGGS





SSB
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TTTGGGSTTGGG
B

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T
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   1283......1290.........1300.........1310.........1320.........1330.........1340.........1350.........1360..
 
   494.....500.........510.........520.........530........ .540.........550.........560....
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Query Sequence  TPQILILDEATASIDSGTEQAIQHALAAVREHTTLVVIAHRLSTI. VDADTILVLHRGQAVEQGTHQQLLAA
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Template Sequence  KAKILLLDEPSAHLDPVTYQIIRRTLKQ. AFADCTVILCEARIEAMLECDQFLVIEENKVRQYDSILELYHY
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   1363......1370.........1380.........1390 .........1400.........1410.........1420.........1430...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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