Job Description P0AAG5 Confidence 96.04% Date Thu Jan 5 11:12:52 GMT 2012 Rank 148 Aligned Residues 128 % Identity 20% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	N	L	S	V	P	S	R	N	F	V	A	L	V	G	H	T	G	S	G	K	S	T	L	A	S	L	L	M	G	Y	Y	P	L	T	E	G	E	I	R	L	D	G	R	P	L	S	S	L	S	H	S	A	L	R	Q	G	V	A	M	V	Q	Q	D	P	V	V	L	A	D	T	F	L	A	N	V	T	L	G
Query Conservation
Alig confidence																																				.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	.	N	E	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	L	M	A	A	G	D	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S					S	S	S										T	T	S															.		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.																			.	.	.	.	.	.	200	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.		.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		R	D	I	S	E	E	R	V	W	Q	A	L	E	T	V	Q	L	A	E	L	A	R	S	M	S	D	G	I	Y	T	P	L	G	E	Q	G	N	N	L	S	V	G	Q	K	Q	L	L	A	L	A	R	V	L	V	E	T	P	Q	I	L	I	L	D	E	A	T	.	A	S	I	D	S	G	T	E	Q	A	I	Q	H
Query Conservation																																																																				.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A
Template Known Secondary structure																	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S										S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.															.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		518	.	520	.	.							.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure							.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.
Query Sequence		A	L	A	A	V	.	.	.	.	.	.	R	E	H	T	T	L	V	V	I	A
Query Conservation							.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.
Template Conservation
Template Sequence		C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D
Template Known Secondary structure								T	T	S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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