Job Description P0AAG5 Confidence 95.98% Date Thu Jan 5 11:12:52 GMT 2012 Rank 151 Aligned Residues 148 % Identity 20% Template c2dflA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: crystal structure of left-handed rada filament Resolution 2.90 Å

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		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.								.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.
Query Sequence		V	P	S	R	N	F	V	A	L	V	G	H	T	G	S	G	K	S	T	L	A	S	L	L	M	G	Y	Y	P	L	T	E	G	.	.	.	.	.	.	.	E	I	R	L	D	G	R	P	L	S	S	L	S	H	S	A	L	R	Q	G	V	A	M	V	Q	Q	D	P	V	V	L	A	D	T	F	L	A	N	V	T
Query Conservation																																			.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.								.	.																				.	.	.	.
Template Conservation																																																	.	.																				.	.	.	.
Template Sequence		I	E	T	R	T	M	T	E	F	F	G	E	F	G	S	G	K	T	Q	L	C	H	Q	L	S	V	N	V	Q	L	P	P	E	K	G	G	L	S	G	K	A	V	Y	I	D	T	E	.	.	G	T	F	R	W	E	R	I	E	N	M	A	K	A	L	G	L	D	I	.	.	.	.	D	N	V	M	N	N	I	Y
Template Known Secondary structure		B		T	T	S							S	T	T	S	S	T	T										S	S	S		G	G	G	T	S		S								S	S	.	.	S															T				.	.	.	.						T
Template Predicted Secondary structure																																																	.	.																				.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.			.	.	.	.	.	.	.	500	.										.	.	.	.
Predicted Secondary structure																																																										.	.										.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.										.	.	.	.	.	.	.	.	.
Query Sequence		L	G	R	D	I	S	E	E	R	V	W	Q	A	L	E	T	V	Q	L	A	E	L	A	R	S	M	S	D	G	I	Y	T	P	L	G	E	Q	G	N	N	L	S	V	G	Q	K	Q	L	L	A	L	A	R	V	L	V	.	.	E	T	P	Q	I	L	I	L	D	.	.	.	.	.	.	.	.	.	E	A	T	A
Query Conservation																																																										.	.										.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.										.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	R	A	I	N	T	D	H	Q	I	A	I	V	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	L	V	S	K	D	P	S	I	K	L	I	V	V	D	S	V	T	S	H	F	R	A	E	Y	P	G	R
Template Known Secondary structure							S										T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T									T	T							S		T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																																			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.						.	.	.	.	.	530	.	.	.		.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure																					.	.	.	.	.										.
Query SS confidence																					.	.	.	.	.										.
Query Sequence		S	I	D	S	G	T	E	Q	A	I	Q	H	A	L	A	A	V	R	E	.	.	.	.	.	H	T	T	L	V	V	I	A	H	.	R	L	S	T	I	V	D	A	D	T	I	L	V	L	H	R	G	Q
Query Conservation																					.	.	.	.	.										.
Alig confidence																					.	.	.	.	.										.
Template Conservation
Template Sequence		E	N	L	A	V	R	Q	Q	K	L	N	K	H	L	H	Q	L	T	R	L	A	E	V	Y	D	I	A	V	I	I	T	N	Q	V	M	H	T	L	Y	H	V	P	G	I	R	I	Q	L	K	K	S	R
Template Known Secondary structure		T	S	T	T																			T	T	T															S	S		S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions