Job Description P0AAG5 Confidence 97.39% Date Thu Jan 5 11:12:52 GMT 2012 Rank 96 Aligned Residues 158 % Identity 13% Template c1wxqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3 Resolution 2.60 Å

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		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	A	L	V	G	H	T	G	S	G	K	S	T	L	A	S	L	L	M	G	Y	Y	P	L	T	E	G	E	I	R	L	D	G	R	P	L	S	S	L	S	H	S	A	L	R	Q	G	V	A	M	V	Q	Q	D	P	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.
Template Sequence		E	I	G	V	V	G	K	P	N	V	G	K	S	T	F	F	S	A	A	T	L	A	N	V	G	V	T	Y	A	I	T	D	H	P	C	K	E	L	G	C	S	P	N	P	.	.	.	Q	N	Y	E	Y	R	N	G	L	A	L	I	P	V	K	X	V	D	V	A	F	L	D	D	L	R	X	A	S	A	L	I	H
Template Known Secondary structure									T	T	S	S																							S		S	S	S			S				.	.	.	S	S	S				T	T																S	S	T	T		S
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
						427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.			.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.								.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure		.	.	.	.																																	.	.																		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																	.	.																		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	L	A	D	T	F	L	A	N	V	T	L	G	R	D	I	S	E	E	R	V	W	Q	A	L	E	T	V	Q	L	A	E	L	.	.	A	R	S	M	S	D	G	I	Y	T	P	L	G	E	Q	G	N	.	.	.	.	.	.	.	N	L	S	V	G	Q	K	Q	L	L	A	L	A	R	V	L	V	E
Query Conservation		.	.	.	.																																	.	.																		.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																	.	.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	D	A	T	G	K	T	D	P	E	G	Q	P	T	D	Y	H	D	P	V	E	D	I	E	F	L	E	R	E	I	D	Y	W	I	Y	G	I	L	S	K	G	W	D	K	F	A	K	R	I	K	L	Q	K	I	K	L	E	S	A	I	A	E	H	L	S	G	I	G	V	N	E	N	D	V	W	E	A	X	H
Template Known Secondary structure					T	T			B		T	T	S		B		S																									T	T	T					S	T	T	T	S	S												T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	Q	I	L	I	L	D	E	A	T	A	S	I	D	S	G	T	E	Q	A	I	Q	H	A	L	A	A	V	R	E	H	T	T	L	V	V	I	A	H
Query Conservation
Alig confidence																	.	.															.	.
Template Conservation																	.	.															.	.
Template Sequence		K	L	N	L	P	E	D	P	T	K	W	S	Q	D	D	.	.	L	L	A	F	A	S	E	I	R	R	V	N	K	P	.	.	X	V	I	A	A	N	K
Template Known Secondary structure			T	T			S		G	G	G						.	.													S		.	.
Template Predicted Secondary structure																	.	.															.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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