 |
Job Description | P52048 | Confidence | 96.91% | Date | Thu Jan 5 12:05:00 GMT 2012 |
Rank | 183 | Aligned Residues | 107 |
% Identity | 15% | Template | d1v8ba1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Formate/glycerate dehydrogenases, NAD-domain
|
Resolution | 2.40 |
|
 |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | A | N | Y | H | T | T | Q | Y | V | Y | E | H | R | M | G | V | K | P | G | G | N | I | A | L | L | A | C | A | G | P | M | G | I | G | A | I | D | Y | A | I | N | G | G | I | Q | P | S | R | V | V | V | V | D | I | D | D | K | R | L | A | Q | V | Q | K | L | L | P | V | E | L | A | A | S | K | G | I | E | L | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
| . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
Y | G | C | R | H | S | L | P | D | G | L | M | R | A | T | D | F | L | I | S | G | K | I | V | V | I | C | G | Y | G | D | V | G | K | G | C | A | S | S | M | K | G | L | G | . |
. |
. |
A | R | V | Y | I | T | E | I | D | P | I | C | A | I | Q | A | V | M | E | G | F | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| T | T | S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  | T | T | T |
|  | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | |
|
|
. | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | |
|
|
|
|
|
|
|
|
|
|
  |
  |   |
236 | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | |
. | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | V | N | T | K | G | M | S | D | P | V | Q | M | L | R | A | L | T | G | D | A | G | F | D | D | I | F | V | Y | A | A | V | P | A | V | V | . |
E | M | A | D | E | L | L | A | E | D | G | C | L | N | F | F | A |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |
|   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   | . |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . |   |
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
V | V | T | L | D | E | I | V | D | . |
. |
. |
. |
. |
. |
K | G | D | F | F | I | T | C | T | G | N | V | D | V | I | K | L | E | H | L | L | K | M | K | N | N | A | V | V | G | N | I | G |
Template Known Secondary structure |   |
. | . | . | . | . | . |  |
|
|  |  |  |  | T | T | . | . | . | . | . | . | T |
| S |  |  |  |  |
|
| S | S | S | S | S | B |
|  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |
| S |
Template Predicted Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
303 | . | . | . | . | . | . | 310 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|