|   |
3 | . | . | . | . | . | . | 10 | . | . | . | |
|
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | K | V | A | A | I | Y | G | K | R | D | . |
. |
. |
V | R | L | R | V | F | E | L | P | E | I | T | D | N | E | L | L | V | S | V | I | S | D | S | V | C | L | S | T | W | K | A | A | L | L | G | S | E | H | K | R | V | P | D | D | L | E | N | H | P | V | I | T | G | H | E | C | A | G | V | I | V | E | V | G | K |
Query Conservation |   |
  |
|
|   |   |   |   |
|   |   |   | . | . | . |
|   |
|   |
|   |
|   |
|   |
|   |   |   |
|
|
|
|
|
|   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|
|   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |
|   |
|   |
|   |   |
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | T | R | I | E | F | H | K | H | G | G | P | E | V | L | Q | A | V | E | F | T | P | A | D | P | A | E | N | E | I | Q | V | E | N | K | A | I | G | I | N | F | I | D | T | Y | I | R | S | G | L | Y | P | P | P | . |
. |
. |
. |
. |
. |
. |
S | L | P | S | G | L | G | T | E | A | A | G | I | V | S | K | V | G | S |
Template Known Secondary structure |   |
|  |  |  |  | B | S | S |
|
| S | G | G | G |
|  |  |  |  |
|
|
|
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | T | S | S |
|
| S | . | . | . | . | . | . | . | S | S | S | B |
|
|
| S |
|  |  |  |  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | L | T | G | K | Y | K | K | G | Q | R | F | V | L | Q | P | A | M | G | L | P | S | G | Y | S | A | G | Y | S | Y | E | Y | F | G | G | N | A | T | Y | M | I | I | P | E | I | A | I | N | L | G | C | V | L | P | Y | H | G | S | Y | F | A | A | A | S | L | A | E | P | M | C | C | I | I | G | A | Y | H | A | N | Y |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   | . |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |
Template Sequence |   |
G | V | K | H | . |
I | K | A | G | D | R | V | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | A | Q | S | A | L | G | A | Y | S | S | V | H | N | I | I | A | D | K | A | A | I | . |
. |
L | P | A | A | I | K | V | D | V | A | E | Q | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | Y | P | L | K | D |
Template Known Secondary structure |   |
T |
|
| S | . |
|
| T | T |
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  | S |
|
| S | S |
|
| S | B | S |  |  |  |  |  | G | G | G |  |  |  | . | . |
|
|
|
|
|
|
|
|
|
| G | G | G | . | . | . | . | . | . | . | . | . | . |  |  |  | G | G | G |
Template Predicted Secondary structure |   |
|
|
|  | . |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |
|
|
| . | . |
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | |
. | 80 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . |
  |
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | T | T | Q | Y | V | Y | E | H | R | M | G | V | K | P | G | G | N | I | A | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   | . |
|   |   |   |   |
|   |   |
|
|
|
Template Sequence |   |
A | Q | R | A | H | E | I | L | E | . |
S | R | A | T | Q | G | S | S | L | L | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | T | T |
|
|
| S |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
307 | . | . | 310 | . | . | . | . | . | |
. | . | . | . | 320 | . | . | . | . | . | . |
  |