Job Description P52048 Confidence 96.65% Date Thu Jan 5 12:05:00 GMT 2012 Rank 215 Aligned Residues 110 % Identity 11% Template c3id5F_ PDB info PDB header:transferase/ribosomal protein/rna Chain: F: PDB Molecule:fibrillarin-like rrna/trna 2'-o-methyltransferase; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna Resolution 4.01 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	.	.	.	.	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y
Query Conservation																																																										.	.	.	.
Alig confidence																							.				.														.																	.	.	.	.
Template Conservation																							.				.														.
Template Sequence		G	A	I	L	K	G	L	K	T	N	P	I	R	K	G	T	K	V	L	Y	L	.	G	A	A	.	S	G	T	T	I	S	H	V	S	D	I	I	E	.	L	N	G	K	A	Y	G	V	E	F	S	P	R	V	V	R	E	L	L	L	V	A	Q	R	R	P	N	I	F	P	L	L	A	D	A	R	F	P	Q	S
Template Known Secondary structure						T	T		S						T	T							.	T		T	.	T	S												.	T	T	S																							T	T								T	T		G	G	G
Template Predicted Secondary structure																							.				.														.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	.	.	.	.	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F
Query Conservation																																	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	S	V	V	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	V	L	Y	V	D	I	A	Q	P	D	Q	T	D	I	A	I	Y	N	A	K	F	F	L	K	V	N	G	D	M	L	L	V
Template Known Secondary structure		T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.									S		T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.															.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions