Job Description P52048 Confidence 92.51% Date Thu Jan 5 12:05:00 GMT 2012 Rank 496 Aligned Residues 152 % Identity 18% Template c3gviB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of lactate/malate dehydrogenase from2 brucella melitensis in complex with adp Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A
Query Conservation
Alig confidence																										.	.																						.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.																						.																							.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	I	A	L	I	G	S	G	M	I	G	G	T	L	A	H	L	A	G	L	K	E	L	.	.	G	D	V	V	L	F	D	I	A	E	G	T	P	Q	G	K	G	L	D	I	A	.	E	S	S	P	V	D	G	F	D	A	K	F	T	G	A	N	D	Y	A	A	I	E	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S													T	T		.	.								S	S	S	S											.							T									S	S	G	G	G	G	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.																						.																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		257	.	.	260	.	.	.	.	.	.	.	.														.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	D	D	I	F	V	Y	A	A	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G	G	S	T	D	D	M	K
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																				.	.
Template Conservation																																																					.	.																				.	.
Template Sequence		G	A	D	V	V	I	V	T	A	G	V	P	R	K	D	D	L	L	G	I	N	L	K	V	M	E	Q	V	G	A	G	I	K	K	Y	A	P	E	A	F	V	I	C	I	T	N	P	L	D	A	M	.	.	V	W	A	L	Q	K	F	S	G	L	P	A	H	K	V	V	G	M	A	.	.	G	V	L	D	S	A
Template Known Secondary structure		T		S							S																											T	T								S	S					.	.												G	G	G						.	.
Template Predicted Secondary structure																																																					.	.																				.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.
		324	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		E	A	I	A	L	S	.	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		R	F	R	Y	F	L	S	E	E	F	N	V	S	V	E	D	V	T	V	F	V	L	G
Template Known Secondary structure												T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions