Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 51 Aligned Residues 291 % Identity 16% Template c3gohA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: crystal structure of alcohol dehydrogenase superfamily protein2 (np_718042.1) from shewanella oneidensis at 1.55 a resolution Resolution 1.55 Å

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		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		K	T	K	V	A	A	I	Y	G	K	R	D	.	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V	E	V	G	K	N
Query Conservation														.
Alig confidence														.																																									.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		Q	H	Q	V	W	A	Y	Q	T	K	T	H	S	V	T	L	N	S	V	D	I	P	A	L	A	A	D	D	I	L	V	Q	N	Q	A	I	G	I	N	P	V	D	W	K	F	I	K	A	N	P	I	N	W	.	.	.	.	.	.	.	S	N	G	H	V	P	G	V	D	G	A	G	V	I	V	K	V	G	A	K
Template Known Secondary structure										T	T	T	T														T	T																							T	T			.	.	.	.	.	.	.		T	T					S											T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C	C	I	I	G	A	Y	H	A	N	Y	H
Query Conservation
Alig confidence					.																.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	S	.	K	X	L	G	R	R	V	A	Y	H	T	S	L	K	R	.	.	.	.	.	.	.	.	.	.	.	.	H	G	S	F	A	E	F	T	V	L	N	.	.	.	.	T	D	R	V	X	T	L	P	D	N	L	S	F	E	R	A	.	.	.	.	.	.	.	.	.	.	.	A	A	L	P	C	P	L
Template Known Secondary structure		S		G	.	G	G	T	T									T	T	S	.	.	.	.	.	.	.	.	.	.	.	.			S	S	B	S						.	.	.	.	T	T	S						T	T	S						.	.	.	.	.	.	.	.	.	.	.		T	S
Template Predicted Secondary structure					.																.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120												.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K
Query Conservation
Alig confidence																							.																			.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																			.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	A	W	Q	A	F	E	K	I	P	L	T	K	Q	R	E	V	L	I	V	.	G	F	G	A	V	N	N	L	L	T	Q	X	L	N	N	A	G	Y	.	.	.	.	V	V	D	L	V	S	A	S	L	S	Q	A	L	A	A	K	R	G	V	R	H	L	Y	R	E	P	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S				S								.			S														T		.	.	.	.							S	S										T						S	S	G	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																			.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G	G	S	T	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																				.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	S	Q	V	T	Q	K	Y	F	A	I	F	D	A	A	L	.	.	.	.	.	.	.	.	V	P	S	L	K	A	N	G	H	I	I	C	I	Q	D	R	R	T	I	.	.	.	S	Y	H	E	I	A	L	G	A	L	H	D	F	G	D	R	Q	D	W	Q	I	L	X	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	G	G			S									T	T	.	.	.	.	.	.	.	.	G	G	G																S	.	.	.							G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
													193	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	G	.	G	K	K	L	I
Query Conservation																																											.
Alig confidence																		.	.																								.
Template Conservation																		.	.
Template Sequence		Q	G	E	A	L	L	T	L	I	A	Q	G	K	X	E	I	.	.	A	A	P	D	I	F	R	F	E	Q	X	I	E	A	L	D	H	S	E	Q	T	K	L	K	T	V	L	T	L
Template Known Secondary structure												T	T	S	S			.	.								G	G	G																			S
Template Predicted Secondary structure																		.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions