Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 41 Aligned Residues 317 % Identity 16% Template c3gmsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nadph:quinone reductase; PDBTitle: crystal structure of putative nadph:quinone reductase from2 bacillus thuringiensis Resolution 1.76 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		M	K	T	K	V	A	A	I	Y	G	K	R	D	.	.	.	.	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V	E
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																																										.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		L	H	G	K	L	I	Q	F	H	K	F	G	N	P	K	D	V	L	Q	V	E	Y	K	N	I	E	P	L	K	D	N	E	V	F	V	R	M	L	V	R	P	I	N	P	S	D	L	I	P	I	T	G	A	Y	A	H	R	I	.	.	.	.	.	.	P	L	P	N	I	P	G	Y	E	G	V	G	I	V	E	N
Template Known Secondary structure										S	S		S																		T	T																	G	G	G	G	T	T	T	T	T	T	S	.	.	.	.	.	.		S	S	B				S
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	K	N	L	T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C	C	I	I	G	A	Y	H
Query Conservation
Alig confidence									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	A	F	V	S	R	.	E	L	I	G	K	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	R	G	E	G	T	W	Q	E	Y	V	K	T	S	.	.	.	.	A	D	F	V	V	P	I	P	D	S	I	D	D	F	T	A	A	.	.	.	.	.	.	.	.	.	.	Q	M	Y
Template Known Secondary structure				T	T	S		G	.	G	G	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S		S	S	B	S						.	.	.	.	G	G	G						T	T	S						T	.	.	.	.	.	.	.	.	.	.	T	S	S
Template Predicted Secondary structure									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.		.	.	.	.	.	.	.	.																90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.											.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	Y	H	T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y
Query Conservation
Alig confidence																																													.	.	.																												.	.	.	.	.	.	.
Template Conservation																																													.	.	.																												.	.	.	.	.	.	.
Template Sequence		I	N	P	L	T	A	W	V	T	C	T	E	T	L	N	L	Q	R	N	D	V	L	L	V	N	A	C	G	S	A	I	G	H	L	F	A	Q	L	S	Q	I	L	N	.	.	.	F	R	L	I	A	V	T	R	N	N	K	H	T	E	E	L	L	R	L	G	A	A	Y	V	I	D	T	.	.	.	.	.	.	.
Template Known Secondary structure													T	T	S				T	T						S	S	T	T	S														T	.	.	.								S	S	S	T	T								T		S					T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.								.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.
Query Sequence		V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N	F	Y	N	.	.	.	.	.	.	.	V	H	Y	N	S	T
Query Conservation																																																																					.	.	.	.	.	.	.
Alig confidence		.	.	.	.																												.																																				.	.	.	.	.	.	.
Template Conservation		.	.	.	.																												.
Template Sequence		.	.	.	.	S	T	A	P	L	Y	E	T	V	M	E	L	T	N	G	I	G	A	D	A	A	I	D	S	I	G	G	.	P	D	G	N	E	L	A	F	S	L	R	P	N	G	H	F	L	T	I	G	L	L	S	G	I	Q	V	N	W	A	E	I	V	T	K	A	K	V	H	A	N	I	F	H	L	R	H	W
Template Known Secondary structure		.	.	.	.	T	T	S										T	T	T	S								S	S			.									T													T	T	S											T	S
Template Predicted Secondary structure		.	.	.	.																												.
Template SS confidence
						195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.		.
Query SS confidence																																																					.		.
Query Sequence		H	V	V	G	T	S	G	G	S	T	D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	.	G	.	G	K	K	L	I	Y	N	G
Query Conservation																																																					.		.
Alig confidence																															.																						.		.
Template Conservation																															.
Template Sequence		N	D	E	V	S	P	Y	K	W	Q	E	T	F	R	H	L	I	R	L	V	E	N	E	Q	L	R	F	M	K	.	V	H	S	T	Y	E	L	A	D	V	K	A	A	V	D	V	V	Q	S	A	E	K	T	K	G	K	V	F	L	T	S	Y
Template Known Secondary structure					S																		T	T	S	S					.							G	G	G											T	T			S	S
Template Predicted Secondary structure																															.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions