Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 32 Aligned Residues 318 % Identity 19% Template c3gazA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase superfamily protein; PDBTitle: crystal structure of an alcohol dehydrogenase superfamily protein from2 novosphingobium aromaticivorans Resolution 1.96 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	K	V	A	A	I	Y	G	K	R	D	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V	E	V	G	K	N	L
Query Conservation
Alig confidence																																																			.	.	.	.	.
Template Conservation																																																			.	.	.	.	.
Template Sequence		X	I	A	A	V	V	E	E	A	N	G	P	F	V	L	R	K	L	A	R	P	Q	P	A	P	G	Q	V	L	V	Q	I	E	A	S	G	T	N	P	L	D	A	K	I	R	A	G	E	A	.	.	.	.	.	P	H	A	Q	Q	P	L	P	A	I	L	G	X	D	L	A	G	T	V	V	A	V	G	P	E	V
Template Known Secondary structure									S	T	T															T	T																				T	T			.	.	.	.	.	G	G	G				S	S	B															T	T
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C	C	I	I	G	A	Y	H	A	N	Y	H	T
Query Conservation
Alig confidence				.																					.	.	.	.	.	.	.	.	.	.									.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation				.																					.	.	.	.	.	.	.	.	.	.									.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	.	F	R	V	G	D	A	V	F	G	L	T	G	G	V	G	G	L	Q	G	T	.	.	.	.	.	.	.	.	.	.	H	A	Q	F	A	A	V	D	.	.	.	.	A	R	L	L	A	S	K	P	A	A	L	T	X	R	Q	A	S	.	.	.	.	.	.	.	.	.	.	V	L	P	L	V	F	I	T
Template Known Secondary structure			S	.			T	T									S	S	T	T				S	.	.	.	.	.	.	.	.	.	.	S	B	S						.	.	.	.	G	G	G						T	T	S							.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure				.																					.	.	.	.	.	.	.	.	.	.									.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.											.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.											130	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G
Query Conservation
Alig confidence																																									.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	W	E	G	L	V	D	R	A	Q	V	Q	D	G	Q	T	V	L	I	Q	G	G	G	G	G	V	G	H	V	A	I	Q	I	A	L	A	R	G	A	.	.	.	.	R	V	F	A	T	A	R	G	S	D	L	E	Y	V	R	D	L	G	A	T	P	I	D	A	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	T	T				T	T							T	T	T	S													T	T		.	.	.	.																		T	S					T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G	G	S	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.																											.																												.																						.	.	.
Template Conservation		.																											.																												.
Template Sequence		.	R	E	P	E	D	Y	A	A	E	H	T	A	G	Q	G	F	D	L	V	Y	D	T	L	G	G	P	.	V	L	D	A	S	F	S	A	V	K	R	F	G	H	V	V	S	C	L	G	W	G	T	H	K	L	A	.	P	L	S	F	K	Q	A	T	Y	S	G	V	F	T	L	H	T	L	L	A	N	E	G	L
Template Known Secondary structure		.	S											T	T	S								S	S		T		.																		S				S						.					T	T								T	T						T		S
Template Predicted Secondary structure		.																											.																												.
Template SS confidence
			202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
					319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.					360	.		.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																										.	.	.	.			.
Query SS confidence		.	.	.																																										.	.	.	.			.
Query Sequence		.	.	.	T	D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	.	.	.	.	P	G	.	G	K	K	L	I	Y	N	G
Query Conservation		.	.	.																																										.	.	.	.			.
Alig confidence		.	.	.																			.																							.	.	.	.			.
Template Conservation																							.
Template Sequence		A	H	F	G	E	X	L	R	E	A	D	A	L	V	Q	T	G	K	L	A	P	.	R	L	D	P	R	T	F	S	I	A	E	I	G	S	A	Y	D	A	V	L	G	R	N	D	V	P	R	Q	R	G	K	I	A	I	T	V	E
Template Known Secondary structure																	T	T					.		B		S					T	T											T		T	T					S	S	B
Template Predicted Secondary structure																							.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions