Return to main results Retrieve Phyre Job Id

Job DescriptionP52048
Confidence97.05%DateThu Jan 5 12:05:00 GMT 2012
Rank173Aligned Residues130
% Identity12%Templatec3g5tA_
PDB info PDB header:transferaseChain: A: PDB Molecule:trans-aconitate 3-methyltransferase; PDBTitle: crystal structure of trans-aconitate 3-methyltransferase2 from yeast
Resolution1.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  GAYHANYHTTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVELAASKGI
Query Conservation   
                    
  





 
 


 


 
   
     

  
    

  
  


       
 
Alig confidence 




























.


.












.




















...







Template Conservation     

 

      
          



.


.

  
  

    .    
 


 
  

  
   ...        
Template Sequence  SSSRPSYPSDFYKXIDEYHDGERKLLVDV. GCG. PGTATLQXAQELK. PFEQIIGSDLSATXIKTAEVI. . . KEGSPDTY
Template Known Secondary structure  S





S

S.T
T.TTSS.

SS
...STTTT
Template Predicted Secondary structure 










.


.


.




...




Template SS confidence 















































































   15....20.........30.........40... ... ...50......... 60.........70.........80 ........
 
   233......240.........250.........260..... ....270.........280........
Predicted Secondary structure 














.....





Query SS confidence 
































. . . . .






















Query Sequence  ELVYVNTKGMSDPVQMLRALTGDAGFDDIFVYA. . . . . AVPAVVEMADELLAEDGCLNFFA
Query Conservation      
      
    
   
 
 
 
 
 
  .....
       
   
  

 

  
Alig confidence 
































.....






















Template Conservation    
     
   
             
 
         
    
 
  
 




 
 
  
Template Sequence  KNVSFKISSSDDFKFLGADSVDKQKIDXITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG
Template Known Secondary structure  TT

TT

GGG
TTTTTSS
S
GGGS
Template Predicted Secondary structure 
























Template SS confidence 




























































   8990.........100.........110.........120.........130.........140.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions