 |
Job Description | P52048 | Confidence | 94.13% | Date | Thu Jan 5 12:05:00 GMT 2012 |
Rank | 378 | Aligned Residues | 91 |
% Identity | 8% | Template | c3ftpD_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; |
PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
|
Resolution | 2.05 Å |
|
 |
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | G | N | I | A | L | L | A | C | A | G | P | M | G | I | G | A | I | D | Y | A | I | N | G | G | I | Q | P | S | R | V | V | V | V | D | I | D | D | K | R | L | A | Q | V | Q | K | L | L | P | V | E | L | A | A | S | K | G | I | E | L | V | Y | V | N | T | K | G | M | S | D | P | V | Q | M | L | R | A | L | T |
Query Conservation |   |
  |
|   |   |
|
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |
| . | . | . |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | K | Q | V | A | I | V | T | G | A | S | R | G | I | G | R | A | I | A | L | E | L | A | R | R | G | . |
. |
. |
A | M | V | I | G | T | A | T | T | E | A | G | A | E | G | I | G | A | A | F | K | Q | A | G | L | E | G | R | G | A | V | L | N | V | N | D | A | T | A | V | D | A | L | V | E | S | T | L | K | E | F |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  | S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | A | G | F | D | D | I | F | V | Y | A | A | V |
Query Conservation |   |
  |
|   |
|   |
|   |
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | A | L | N | V | L | V | N | N | A | G | I | T | Q |
Template Known Secondary structure |   |
S |
|
|
|  |  |  |  |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|