Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 39 Aligned Residues 318 % Identity 17% Template c3fbgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative arginate lyase; PDBTitle: crystal structure of a putative arginate lyase from staphylococcus2 haemolyticus Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.							10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		T	K	V	A	A	I	Y	.	.	.	.	.	.	G	K	R	D	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V	E
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.
Template Sequence		L	K	A	I	G	F	E	Q	P	F	K	L	S	D	G	N	L	F	K	T	F	N	L	D	I	P	E	P	K	V	H	E	I	L	V	K	I	Q	S	I	S	V	N	P	V	D	T	K	Q	R	L	M	D	.	.	.	.	.	.	.	.	.	V	S	K	A	P	R	V	L	G	F	D	A	I	G	V	V	E	S
Template Known Secondary structure							B	S	S				G	G	G																T	T																			T	T	S		.	.	.	.	.	.	.	.	.		S	S	S		B
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	K	N	L	T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C	C	I	I	G	A	Y	H
Query Conservation
Alig confidence									.																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																		.	.	.	.
Template Conservation									.																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																		.	.	.	.
Template Sequence		V	G	N	E	V	T	M	.	F	N	Q	G	D	I	V	Y	Y	S	G	S	P	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	N	G	S	N	A	E	Y	Q	L	I	N	E	R	L	V	A	K	.	.	.	.	A	P	K	N	I	S	A	E	Q	A	V	S	L	P	L	T	G	.	.	.	.	I	T	A
Template Known Secondary structure				T	T			S	.			T	T									T	T	S	.	.	.	.	.	.	.	.	.	.	.	.			S	S	B	S						G	G	G				.	.	.	.			S	S	S						T	T	S					.	.	.	.
Template Predicted Secondary structure									.																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																		.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	Y	H	T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y
Query Conservation
Alig confidence																																													.	.	.																												.	.	.	.	.	.	.
Template Conservation																																													.	.	.																												.	.	.	.	.	.	.
Template Sequence		Y	E	T	L	F	D	V	F	G	I	S	R	N	R	N	E	N	E	G	K	T	L	L	I	I	N	G	A	G	G	V	G	S	I	A	T	Q	I	A	K	A	Y	G	.	.	.	L	R	V	I	T	T	A	S	R	N	E	T	I	E	W	T	K	K	M	G	A	D	I	V	L	N	H	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	S				S	S					T	T							S	T	T	S													T	T	.	.	.									S											T		S					T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.								.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.
Query Sequence		V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	.	.	.	.	.	.	.	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T
Query Conservation																																																												.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																					.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	K	E	S	L	L	N	Q	F	K	T	Q	G	I	E	L	V	D	Y	V	F	C	T	F	N	T	D	M	Y	Y	D	D	M	I	Q	L	V	K	P	R	G	H	I	A	T	I	V	A	F	E	N	D	Q	D	L	N	A	L	K	P	K	S	L	S	F	S	H	E	F	M	F	A	R	P	L
Template Known Secondary structure		.	.	.	.	.	.	T	S										T										S	S																						S	S			S	S				G	G	G	G	T	T	T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.
Predicted Secondary structure																															.																								.
Query SS confidence																															.																								.
Query Sequence		H	V	V	G	T	S	G	G	S	T	D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	.	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	G	.	G	K	K	L	I
Query Conservation																															.																								.
Alig confidence																															.																								.
Template Conservation
Template Sequence		N	Q	T	D	D	M	I	K	H	H	E	Y	L	E	D	I	T	N	K	V	E	Q	N	I	Y	Q	P	T	T	T	K	V	I	E	G	L	T	T	E	N	I	Y	Q	A	H	Q	I	L	E	S	N	T	M	I	G	K	L	V	I
Template Known Secondary structure		T	T		T	T	T																T	T	S	S										S															T	T				S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions