Job Description P52048 Confidence 94.97% Date Thu Jan 5 12:05:00 GMT 2012 Rank 335 Aligned Residues 96 % Identity 29% Template c3dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy Resolution 1.55 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D
Query Conservation
Alig confidence												.													.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.													.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	Q	V	L	D	L	G	A	G	.	Y	G	A	L	T	L	P	L	A	R	M	G	.	.	.	.	A	E	V	V	G	V	E	D	D	L	A	S	V	L	S	L	Q	K	G	L	E	A	N	A	L	K	A	Q	A	L	H	S	D	V	D	E	A	L	T	E	E	A	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T							T		T	.	T	S	T	T							T	T	.	.	.	.								S	B														T	T									S	T	T	T	T	S		T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.													.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.												.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	F	D	D	I	F	V	Y	A	A	V	.	.	.	.	.	.	.	.	.	.	.	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A
Query Conservation														.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	R	F	D	I	I	V	T	N	P	P	F	H	V	G	G	A	V	I	L	D	V	A	Q	A	F	V	N	V	A	A	A	R	L	R	P	G	G	V	F	F	L	V	S
Template Known Secondary structure		.													T	T		S	S
Template Predicted Secondary structure		.
Template SS confidence
			298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions