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Job Description | P52048 | Confidence | 93.46% | Date | Thu Jan 5 12:05:00 GMT 2012 |
Rank | 434 | Aligned Residues | 77 |
% Identity | 21% | Template | c3ckyA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:2-hydroxymethyl glutarate dehydrogenase; |
PDBTitle: structural and kinetic properties of a beta-hydroxyacid dehydrogenase2 involved in nicotinate fermentation
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Resolution | 2.30 Å |
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177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
N | I | A | L | L | A | C | A | G | P | M | G | I | G | A | I | D | Y | A | I | N | G | G | I | Q | P | S | R | V | V | V | V | D | I | D | D | K | R | L | A | Q | V | Q | K | L | L | P | V | E | L | A | A | S | K | G | I | E | L | V | Y | V | N | T | K | G | M | S | D | P | V | Q | M | L | R | A | L | T | G | D | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | I | G | F | I | . |
G | L | G | A | M | G | K | P | M | A | I | N | L | L | K | E | G | . |
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V | T | V | Y | A | F | D | L | M | E | A | N | V | A | A | V | V | A | Q | G | A | Q | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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6 | . | . | . | 10 | |
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50 | . | . | . | . | . | . | . | . | . | |
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257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | F | D | D | I | F | V | Y | A | A | V | P | A | V | V | E | M | A | D | E | L | L | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | S | D | I | I | F | T | S | L | P | N | A | G | I | V | E | T | V | M | N | G | P | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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