 |
Job Description | P52048 | Confidence | 97.06% | Date | Thu Jan 5 12:05:00 GMT 2012 |
Rank | 170 | Aligned Residues | 106 |
% Identity | 19% | Template | c3cbgA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:o-methyltransferase; |
PDBTitle: functional and structural characterization of a2 cationdependent o-methyltransferase from the3 cyanobacterium synechocystis sp. strain pcc 6803
|
Resolution | 2.00 Å |
|
 |
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | G | N | I | A | L | L | A | C | A | G | P | M | G | I | G | A | I | D | Y | A | I | N | G | G | I | Q | P | S | R | V | V | V | V | D | I | D | D | K | R | L | A | Q | V | Q | K | L | L | P | V | E | L | A | A | S | K | G | I | E | L | V | Y | V | N | T | K | G | M | S | D | P | V | Q | M | L | R | A | L | T |
Query Conservation |   |
  |
|   |   |
|
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
| . |
|   |
| . |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   | . |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . |
|   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
G | A | K | Q | V | L | E | I | . |
G | V | F | . |
R | G | Y | S | A | L | A | M | A | L | Q | L | P | P | D | . |
G | Q | I | I | A | C | D | Q | D | P | N | A | T | A | I | A | K | K | Y | W | Q | K | A | G | V | A | E | K | . |
. |
. |
. |
I | S | L | R | L | G | P | A | L | A | T | L | E | Q | L | T | Q | G | K |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  | . |
|
| T | . | T | S |  |  |  |  |  |  |  | T | T | S |
| T | T | . |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G | . | . | . | . |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  | T | S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  | . |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
60 | . | . | . | . | . | . | . | |
. | . | 70 | |
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
  |
  |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
|
|
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | A | G | F | D | D | I | F | V | Y | A | A | V | P | . |
. |
. |
A | V | V | E | M | A | D | E | L | L | A | E | D | G | C | L | N | F |
Query Conservation |   |
  |
|   |
|   |
|   |
|   |
|   |   |
|   |   | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
Template Sequence |   |
P | L | P | E | F | D | L | I | F | I | D | A | D | K | R | N | Y | P | R | Y | Y | E | I | G | L | N | L | L | R | R | G | G | L | M | V | I |
Template Known Secondary structure |   |
S |
|
|
|  |  |  |  |  |  |
| S |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|